Salvia hispanica (chia): 125208137
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Entry
125208137 CDS
T09851
Name
(RefSeq) protein PHYTOCHROME-DEPENDENT LATE-FLOWERING
Organism
shis
Salvia hispanica (chia)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHL
Spt20_SEP
CRPA
Motif
Other DBs
NCBI-GeneID:
125208137
NCBI-ProteinID:
XP_047963668
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All DBs
Position
2:complement(756727..763030)
Genome browser
AA seq
1304 aa
AA seq
DB search
MGISFKVSKTGRRFRPKPLPSNAAVPRAEDDEFIDSQIAASKQKTDASARKLGEARENKG
ITKIGDNEVSFTLKLFPDGYSIGKPVENESANQTSNDVPKLLHPYDRASEALFSAIESGR
LPGDILDDIPCKYIDGTIICEVRDYRKCFAEGVNVASGESSPAINRVSLKMSLENIVKDI
PAISENGWTYGDLMEVESRILKAIQPQLCLDPSPQLDKLSEDPIQNKLNLELRSMRRKRL
RQISEANNHGKKASLDRVPESSRLGDAGTLVQQPAYENTNSQNNVSNAMLQLRSNGFGSD
GSLLPSPMTSYQPKYTGGVSPRMKDQRTGALLNASVGSPGGQDMMIPFADNIAASLHGKR
ENQDGQSSPLTNKKARLTHAGPEGNIQHFGSQMDPLHGTESHWKNTLIQQQSIGRVMQYA
NNGMQKFPQQAFEGSLNQEGGQMPFSVGQQGIRYNLKEEPVETDRLDKPDGRVAMGENEL
ANIDSQQSRLQQRMPHQMMRSGFPQSPWNNLGQPLDNNSRKEDPFQKRKLVQSPHVSGSG
LPQSPLSSRSGEFSSGSMGQFGAVVTSGLVSSQKDKSAVTSVGVGGNPSFTSSANESVQR
HPHAQAAAKRRSNSLPKTPAMSGVGSPASVGNMSLPSPPVGSQTLGDQTTLERFSKIEMV
AMRFQLNCKKGKVEEYPIRKPNAFSAQQLMSHFSSDSNNENLKDETCQMPLSKSLVGGSM
NVCKTRILNFIQTERILQGNTFQMVQKSRTRMIMSEKPYEGAVAIHIGEIEDADYLAAED
YLPTLPNTHMADLLAAQYSLLMTREGYHMEDHVQPKPVRMNPNSGTQPNPSGISPTSAAP
EMQQFSEGVSLQQSSDVAKPSNSGNSTSSQNLQGMRVLPPGGAQAIQMSQGLLPGVSVSS
RPQQPEQLPPMQQQPQLPQQHPQFQRMLPTNSMQHLNNIAQNANMQLGPHTTNKNTALQF
QMMQQQQQSQLLQPQQQQQLMQRKMMPGLGNVGMGNIGNNMMGLGVGGLGNVMGIGGARG
VSGSGISAPMGSMSNIGNMNQNPMNLTSAASLTNAIRSGTLTQQQAFMKMKLGNQNRANL
LGNPQSSIGGIPGARQMHPGSNLSMLGPAALNRANMNQMQRTAMGPPKVPGMNPYMNQQQ
HQLQQQQLHLQQQQQQQQLQMQQQQQQQQQQQQQQQQQQMQQQLQQQQLQQQPQPQQQET
TSPLQAVVSPPPVGSPSSVGIPHQMTQQQQQQQQQQASPQQMSQRTPMSPQLSSGAIHPM
GAGNPEACPASPQLSSQTMGSVGSIANSPMELQGVNKSNSVNNV
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggggatctcgtttaaggtctccaaaacaggtcggcgatttcgccccaaaccgctgccg
tcaaatgcggccgttccacgcgccgaagatgacgaattcatcgattcccaaattgctgcg
tcgaagcagaaaactgatgcctctgctcggaagctgggagaggccagagagaacaaggga
atcactaaaattggagataatgaagtttcattcactcttaaactttttccggatggatat
tcgatcgggaaacctgttgagaatgaatctgccaaccagacatccaacgatgtaccgaag
ttattgcatccatatgatagagcatcagaggctcttttttcggcaattgaatctggtcga
ttgccgggagatattctggatgacataccatgcaaatatattgatgggacaattatctgt
gaggtgcgagattatcgcaagtgctttgctgaaggagttaacgtggcttctggcgaaagc
tcacctgcaatcaacagagtgtctctcaaaatgtcactggaaaatatagtgaaggatatt
ccagctatttcagaaaatggttggacatatggtgatctgatggaagtggagtctagaatt
ttgaaagctatacaaccacaactttgtcttgatccatccccacagctagacaaactatct
gaagatccaattcaaaataagttaaatttagaactacgcagcatgcgaaggaaaagattg
aggcagatttctgaagctaataaccatggaaagaaggcaagtcttgatagagttccagaa
agttctaggttgggagatgcaggaactttagtgcagcaacctgcctatgagaatacaaac
agtcaaaataatgtttcgaatgctatgcttcaactaagaagcaatggctttgggtcggat
ggctctcttctgccttcacctatgacatcctaccaaccaaaatataccggaggcgtaagc
ccaagaatgaaggatcagcggacaggagcacttttgaatgcctctgtaggttctcctggt
gggcaggacatgatgatcccattcgctgataacattgctgcttctcttcatggcaagagg
gagaatcaagatggacaatcatctccattgaccaacaagaaggctaggcttacacatgca
ggtcctgagggaaatatacagcattttggttcacagatggatccattacatgggactgaa
tctcactggaagaacacattaatacagcagcagtcaattggaagagtcatgcagtatgct
aacaatggcatgcaaaagttccctcagcaggcatttgaagggagtctaaatcaggaagga
gggcagatgccattcagtgttggacagcaaggaataagatacaacctgaaggaagaacct
gttgagacagatagattggataaacccgatggtcgtgtggccatgggagagaatgaatta
gcaaatatcgactcccagcagtcacggttgcagcaaaggatgccacatcagatgatgaga
tctggcttccctcaatctccttggaacaatcttggacagcctcttgataataattctaga
aaggaagaccctttccagaagagaaaattggttcagagtcctcatgtttctggcagtggc
ttgcctcaatctcctttgtcgtcaagatctggagaattttctagtggttctatggggcaa
tttggagctgttgtaactagtgggctcgtatcatcacaaaaggataaatctgcggtcaca
tctgttggtgttggtggcaacccgtctttcacttcaagtgctaatgagtctgtgcagagg
catcctcatgcacaggcagctgcaaaacgcagatctaattctcttcctaagacccctgca
atgagtggagttggctctccagcaagtgttggcaatatgagcttaccaagccctcctgtt
gggagtcagacattgggtgatcagaccacattggaaagattctcgaagatagaaatggta
gctatgaggtttcaacttaattgcaaaaagggtaaggtggaagagtaccctatcaggaaa
cctaatgcattttcagctcaacagctgatgtctcatttctcaagtgattcaaacaatgag
aatttgaaagatgaaacatgtcaaatgccactgtcaaagtccctggttggtggtagcatg
aatgtttgcaagaccaggattttgaactttattcagacagagcgcattcttcaaggtaat
accttccaaatggtccaaaagtccagaactaggatgatcatgtcggagaaaccatatgag
ggtgctgttgcaattcatataggggagatagaggacgcagattacttggctgcagaggat
taccttccaacattgccaaatactcacatggctgatctacttgcagcgcagtattcttta
ctgatgacacgggaaggttatcacatggaggatcacgtccaaccaaaacctgttcggatg
aatcctaactcagggacccagcccaatccttcgggaatatctcccactagcgcagcacct
gagatgcagcagttttctgaaggtgtttctctgcagcaatcgagcgatgtcgcaaaaccg
agcaacagtggtaattcaacctcatcacagaacctacaaggcatgagggtgctgcctcca
ggaggtgctcaggcaattcaaatgtcccaaggacttctacctggggtttcagtgtcttca
aggcctcagcaacccgaacaactgccgcctatgcaacagcaacctcaactgccgcagcag
catccccagttccaaaggatgctcccaacgaactcgatgcagcatctgaataatatagct
cagaatgctaacatgcagttggggcctcatacgacaaacaagaacacagctctccagttt
cagatgatgcaacaacagcaacaatcgcaacttcttcagccgcagcagcagcagcagtta
atgcaaagaaaaatgatgcctggccttggaaacgtcgggatgggaaatattggcaataat
atgatggggcttggagttggaggcttgggtaatgtcatgggaatcggtggggctaggggt
gtgagtggatcgggcatttctgcaccgatggggtctatgtcaaacataggaaatatgaat
cagaaccccatgaatctgacttctgctgcaagtcttactaatgccattagatccgggacg
cttacacagcagcaagctttcatgaaaatgaagttgggaaaccaaaacagagcgaatttg
ttgggaaacccgcagtcgagtattggaggcatacctggcgctagacagatgcatccagga
tcaaatctttccatgctcggccctgctgctctaaaccgggccaatatgaatcagatgcaa
cgtacagctatgggtccaccgaaggtaccgggaatgaatccttacatgaaccagcagcaa
catcagcttcagcagcagcagctacacttacagcaacaacaacagcagcagcaactacag
atgcagcagcagcagcagcagcaacaacaacaacaacaacagcagcagcagcagcagatg
cagcaacagctgcaacaacagcaactacagcagcagccgcagccacagcagcaagaaaca
acgtcaccattgcaagctgttgtttcgcctccaccagtcggatcgccttcaagcgtgggg
attccccaccaaatgactcagcaacagcaacagcaacagcaacagcaggccagtccccag
caaatgagccagagaactccgatgagcccacagctcagttctggggccattcatccgatg
ggtgctggtaatccagaagcctgtcccgccagtcctcagttgagctcacagaccatgggc
tcagtcggtagcatcgcaaactctccaatggagctacagggtgtcaacaaaagtaactct
gtaaataatgtatag
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integrated database retrieval system
