Salvia hispanica (chia): 125208143
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Entry
125208143 CDS
T09851
Name
(RefSeq) chaperonin 60 subunit alpha 2, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125208143
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125208143
03110 Chaperones and folding catalysts [BR:
shis03110
]
125208143
03029 Mitochondrial biogenesis [BR:
shis03029
]
125208143
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
shis04147
]
125208143
Enzymes [BR:
shis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
125208143
Messenger RNA biogenesis [BR:
shis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
125208143
Chaperones and folding catalysts [BR:
shis03110
]
Heat shock proteins
HSP60 / Chaperonin
125208143
Mitochondrial biogenesis [BR:
shis03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
125208143
Exosome [BR:
shis04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
125208143
Exosomal proteins of other body fluids (saliva and urine)
125208143
Exosomal proteins of breast cancer cells
125208143
Exosomal proteins of colorectal cancer cells
125208143
Exosomal proteins of bladder cancer cells
125208143
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
TAL_FSA
Motif
Other DBs
NCBI-GeneID:
125208143
NCBI-ProteinID:
XP_047963676
LinkDB
All DBs
Position
2:complement(36134981..36138957)
Genome browser
AA seq
584 aa
AA seq
DB search
MSLPFSSPMFLHSGASFSGLRGRSNPNGLWQRNSVRKTMLVVKAGPKRIEFDKKCRDALL
SGINKLADAVSVTLGPKGRNVVLSESEKLKVINDGVTIARAIELPDTIENAGVLLIQEVA
TKTNGSAGDGTTTAILLAREMIRYGLLAITNGANPVSLKKGMERTVDELVKVLSEKSYAV
RGSDEIKAIASLSAGNDEYIGNLIAEAIEKIGPDGVISIESSSSSETSVTVDEGMKIDKG
YMSPHFVTNKDKSIVEFENARVLVTDLKISSLKEIVPLLEKSTQLSVPLLIFAEDISRQV
LETLVLNKMQGVLNVAVVKCPGLGEGKKAILQDIALMTGADFISGDFGVALETTTSDQLG
IARKVTITSNFTTIVADPSTKAEIKARIMQIKKDLAETDSKYLAEKLSGRIAKLCGGVAV
LKVGAHTEVELEDRKLRIEDAKNATFAAMAEGVVPGGGATYIHLSKQIPVIKDAFEDPDE
QIGADIVGKALLAPAKVIAANAGVDGDVVLEKIRACDSNFGYNAMTGRYEDLIAAGVIDP
CRVSRCALQNAVSVAGMILTTQAILVEKIKKPKPLVPQIPGISP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgccattttcttccccgatgttcttgcattctggtgcttcattctccggatta
cgtggaagatcaaatccaaatgggttgtggcagagaaacagcgtgaggaagacgatgtta
gtggtgaaagcaggtccgaagagaattgaatttgacaaaaaatgcagagatgctttactt
tcggggattaataagcttgccgatgctgtttctgtgactttggggccgaaaggccgtaac
gtggtcctttcagagtctgagaaactcaaagtgataaatgatggtgtaactattgcccgg
gccatagagcttcccgacacaattgagaatgctggagtgctgctaatccaagaggttgca
accaaaacaaatgggtcggcgggtgatggtacgacaactgcgattttgttggcccgagaa
atgattagatatgggttattggctatcaccaatggggctaaccctgtatccttaaagaaa
ggaatggagaggacagtggatgaattggttaaggtattgagtgagaaaagttatgctgta
aggggcagtgatgaaattaaagccatagcttcattgtctgctggaaatgatgaatatatt
ggaaacttaattgctgaagctattgagaaaattggccctgatggtgtaatatcaattgaa
tcgtcttcatcatctgaaacttctgtgacagtcgatgaaggaatgaagatagataaagga
tacatgtcgccgcactttgtcacaaataaggataaatcgatagtggaatttgagaatgcc
agagttctggtgactgatctaaagatatccagcctgaaggagattgttccgttactggag
aagtctacacaattgagtgtccctctactgatttttgctgaagacatatctcggcaagtg
ctggaaactctagtcttgaacaaaatgcaaggtgtgcttaacgttgccgttgtaaaatgt
ccaggtcttggagaaggaaagaaggctatattgcaggatattgctcttatgactggagct
gactttatatcgggagattttggggtggctcttgaaacaacaacttctgatcagcttggt
attgctcgaaaagtaacaattactagcaattttaccactatagtggcggatccgtccact
aaagctgaaattaaggccagaataatgcagataaaaaaggatcttgctgaaactgatagc
aaatatctagcggaaaagctaagtgggcggattgcaaagctttgtggtggggtggctgtt
ttaaaggttggggctcatacagaagtcgaacttgaagatcgaaaactacgaatagaagat
gcaaaaaatgccacatttgcggccatggctgaaggagtggttcctggtggcggagccaca
tacatacatctctcaaagcaaatacctgttatcaaggatgcctttgaagacccagatgag
cagattggtgcagatattgttggaaaggcacttcttgcaccagcaaaagtaattgcagca
aatgcaggggttgatggagatgtggttctggaaaaaattagagcttgtgattcgaatttc
gggtataatgcaatgactgggagatacgaagatctaattgctgctggtgtcatcgaccct
tgccgggtttcaagatgtgcgcttcaaaatgccgtctctgttgctggtatgatcctcacc
actcaagccatactggtcgagaaaatcaagaagcccaagccacttgttccccagattccc
ggtatatccccctga
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