Salvia hispanica (chia): 125208228
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Entry
125208228 CDS
T09851
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125208228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125208228
Spliceosome [BR:
shis03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
125208228
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
125208228
NCBI-ProteinID:
XP_047963766
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Position
2:complement(18036332..18039063)
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AA seq
450 aa
AA seq
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MEEDVDGDLADIEALNYDDLDSVSKLQKTQRFTDIMQKVEDALENGSENSTHGIVLEDDP
EYQLIVDCNALSVDIENEIVIIHNFIRDKYRLKFPELESLVHHPIDYARVVKKIANEMDL
TLVDLEGFLPSAIIMVVSVTASTTSGKPLPEDVLQKTIDACDRALALDSAKKKVLDFVES
RMGYIAPNLSAIVGSAVAAKIIGTAGGLSALAKMPACNVQLLGAKKKNLAGFSTATSQFR
VGYLEQTEIFQSTPPSLRMRACRLLASKSTLAARVDSTRGDPVGKTGRTLRAEIHKKIEK
WQEPPPAKQPKPLPVPDSEPRKKRGGRRLRKMKERYAITDMRKLANRMQFGIPEESSLGD
GLGEGYGMLGQAGSGKLRVSVGQSKLAAKVAKKFKDRSYGTSGATSGLTSSLAFTPVQGI
ELSNPQANQFGGTQSTYFSETGTFSKIKRT
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagacgtagatggtgatttagctgatatagaagcacttaactatgatgatctt
gatagtgtgtcgaagctacaaaaaactcagcgatttactgacatcatgcagaaagttgaa
gatgcattggaaaatgggtctgagaactccactcatggaattgttttggaagatgatcca
gagtatcagttgatagttgattgtaatgccttgtctgtcgatattgaaaatgagattgtg
ataattcacaatttcatccgtgacaagtatcgcttgaaatttccagaacttgaatctctt
gttcaccacccaattgattatgcccgggttgttaaaaagattgctaatgaaatggatctg
acgcttgttgatcttgaaggatttttaccgtctgctattattatggtggtttctgtcaca
gcatcaactactagtggaaagcctcttccggaggatgtcttgcaaaagacaattgatgca
tgtgatcgcgcacttgctctagattctgcaaagaaaaaggttcttgattttgtggagagt
cgaatggggtatattgcccccaatctctcagccatagttggaagtgctgtcgcggcaaaa
ataattggtacagctggtggtctttcggcattagcaaaaatgcctgcatgcaacgttcag
cttcttggtgccaaaaagaagaatttagcagggttttcaacagcaacatcccaatttcgt
gttggctatttggagcaaactgagattttccagagtactccgccttccttaagaatgcgt
gcttgtcgacttttggcttcaaaatccactcttgctgcacgtgtagactctactagggga
gacccagttggaaaaactgggagaactttgcgcgcagagattcacaaaaagatagagaag
tggcaagaaccgcctcctgctaagcagcctaaaccacttccggttcctgattcagagccc
agaaagaagagaggaggtcggcgtttaaggaagatgaaagaaagatatgctattacagac
atgcggaagctggctaacaggatgcagttcgggataccagaggagagttcactaggtgat
ggacttggcgaaggttatggaatgctcggtcaggctggtagcggaaagcttcgtgtatct
gttggacagagcaaacttgctgctaaagtagccaagaagtttaaggacaggagttatgga
accagtggcgcaacttctggactgacatcaagtctggctttcacacccgtccagggaatc
gagctttcaaatcctcaggcgaaccagtttggaggaactcagagtacttatttttcagag
actggaactttttcgaagatcaagagaacatag
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