Salvia hispanica (chia): 125208340
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Entry
125208340 CDS
T09851
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125208340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125208340
03110 Chaperones and folding catalysts [BR:
shis03110
]
125208340
04121 Ubiquitin system [BR:
shis04121
]
125208340
Enzymes [BR:
shis01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
125208340
Spliceosome [BR:
shis03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
125208340
Complex C
U4/U6.U5 tri-SnRNP related factors
125208340
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
125208340
Chaperones and folding catalysts [BR:
shis03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
125208340
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
U-box type E3
125208340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
V-set_CD47
Motif
Other DBs
NCBI-GeneID:
125208340
NCBI-ProteinID:
XP_047963886
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All DBs
Position
2:35917979..35922591
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AA seq
595 aa
AA seq
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MGKKQHSKDRMFITKTEWATEWGGAKSKELAPFKRLPFYCCALTFTQFEVPVCTSDGNVF
DIMHIMPYINKYGRHPVTGAPLKKEDLIPLNFHKNQEGEYHCPVLNKVFTEFTHIVAVKT
TGNVFCYEAIKELNIKTKNWKELLTDEPFSREDIITIQNPNALDTKALVDFDHVKKNLKI
DDEESKKMESDPSYNINVIGDIKQMLKELGTEKAKEIALHGGGGSKARDERAAALEAILE
ARSRIKDDNVSKNGDKPKQGFSIVDAASAAVHGRSADAARSDASNKTAARIAMHMAGERT
PVNAKLVKSRFTSGAASRSFTSTSYDPVTKNEYEYVKVEKNPKKKGYARLQTTHGDLNIE
LHCDITPRTCENFITLCERGYYNGIAFHRSIRNFMIQGGDPTGTGRGGESIWGKPFKDEL
NSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAKHLNFKHTVFGMVVGGLTTLSAMEKVP
VDDDDRPLEEIKIISADVFVNPYAESDDEEEGKTVEEDNNVKDEDNEKIGSWYSNPVTSS
DTPAVGSGVGKYLKARITQPASSAAPLDGDLPSGSVGKKRKVGGSRGELKDFSSW
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaacagcacagtaaggatcggatgttcatcacgaaaacggagtgggccaca
gagtggggcggcgccaagtccaaagaattagccccgtttaaacggcttcctttctattgc
tgcgcactcacgtttacgcagtttgaagtccccgtttgcacttcagatggcaacgtattt
gacatcatgcacataatgccatatatcaacaagtacgggagacatccagtaactggagcg
cccttgaagaaggaggatttgatcccactcaattttcacaagaatcaagaaggagagtat
cattgccctgtcctaaataaagtctttacggagttcacgcacatagttgctgttaaaacc
actggaaatgtgttctgttacgaggccattaaggagttaaacatcaaaactaagaactgg
aaggagcttctcactgatgaaccattctccagagaagatattataactattcaaaatcct
aatgcactggataccaaggctcttgtggatttcgatcatgtcaagaagaacttaaaaatt
gatgatgaagagtcaaagaaaatggaatctgacccgtcttacaacataaatgttattggg
gatataaagcaaatgcttaaggaacttggaactgaaaaggcaaaggagatagcactacat
ggtggaggaggaagcaaggcaagggatgaaagagctgctgctcttgaagccattttggaa
gctagatcacgtatcaaggatgacaatgtatcaaagaatggggacaagcccaagcagggc
ttcagtattgtagatgctgcatctgcagcagtccatgggagaagcgctgatgctgcaagg
tctgatgctagtaataaaactgctgctcgcatagcgatgcacatggcaggggagaggact
ccggtgaatgcaaagctggttaaaagtcgtttcacatctggcgctgcttcacgatctttc
acttctacatcttatgatcctgtgactaaaaatgaatacgaatatgttaaagttgagaaa
aatccaaagaagaagggttatgcacggctgcaaacaacacacggtgatttgaacattgag
ctgcactgtgacatcactccaaggacatgtgaaaacttcatcacgctttgtgagcgtggt
tattataatggaatagcttttcacagaagtataagaaatttcatgattcaaggtggtgat
cctactggaactgggagaggaggtgagtcaatttggggaaagcccttcaaagacgaactc
aactccaagttggttcattctggacgaggtgttgttagcatggcaaattccggtcctcat
acaaatggttcacaatttttcatcttgtacaagtctgcaaagcatttgaactttaagcac
accgtttttggaatggttgttggaggtttgacaacgctttcagcaatggagaaagtacct
gttgatgatgatgatcgacccctggaagagatcaagattataagtgctgatgtatttgtc
aacccatacgctgaatctgatgatgaggaggaagggaagacagtcgaagaagacaataac
gtcaaggatgaagataatgaaaagatcggctcatggtacagtaatccagttactagttca
gatacccctgccgttggcagtggagtcggaaagtacttgaaagcaaggatcactcagcct
gcatcttctgctgctcctctagatggtgatttgccatcggggtccgttgggaagaagaga
aaggtgggagggtcacgcggcgaacttaaggatttttcttcttggtga
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