Salvia hispanica (chia): 125208438
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Entry
125208438 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125208438
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125208438
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
125208438
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-Nse
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
125208438
NCBI-ProteinID:
XP_047964012
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Position
1:8996234..8998117
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AA seq
225 aa
AA seq
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MEKEAGGVVGVAEYRDGYEDLRKKEEKCNENGNEIEYEDGAGDDVCPICLDTFTNPCRSN
CGHLFCGGCILQLWIYRYSIQPCKCPLCCCRIVNLELQTSEEAGYSSDVRKEVQHYNGLY
ISGLFGALHILPLLMGRVFRVLVDLDYLRCIYYVMCVIGLFLGLLYERLEFEFLPTGGLG
IQRMFDLIASLLVAALFLLGVVYRWMLKRRARLLVVVDTSLRNVT
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaagcgggtggtgtggtgggagtagcagaataccgagatggctacgaagat
ttgagaaaaaaagaagaaaaatgtaacgaaaacggaaatgaaattgaatatgaagatggc
gcgggcgatgatgtatgcccaatttgtttggataccttcactaacccttgcagatcaaat
tgcggtcacttgttttgtgggggttgcatcctacaattgtggatatatagatactcaatt
caaccctgcaaatgcccgttgtgctgttgccgaatcgtaaatctggagctccaaacatct
gaagaagccggttatagcagtgatgttcgaaaggaagtgcagcactacaatggcctctac
atctctggcctctttggtgccctccatatattacccttacttatggggagggtgtttaga
gttctagtggatcttgattatttgagatgcatctactacgtaatgtgcgtcattgggttg
tttctggggttactctatgaacggcttgagtttgagtttctaccaactggagggttggga
atccaaagaatgttcgacctgattgctagcttgcttgttgctgctctttttctcctaggt
gtggtgtatagatggatgcttaaacgtcgtgcaaggctcttggttgttgtggatacttca
ctcaggaatgtcacttga
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