Salvia hispanica (chia): 125208505
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Entry
125208505 CDS
T09851
Name
(RefSeq) LIMR family protein At5g01460-like isoform X1
KO
K14617
LMBR1 domain-containing protein 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
125208505
04980 Cobalamin transport and metabolism
125208505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125208505
Membrane trafficking [BR:
shis04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
125208505
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Tetraspanin
Motif
Other DBs
NCBI-GeneID:
125208505
NCBI-ProteinID:
XP_047964097
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All DBs
Position
2:29698729..29705116
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AA seq
440 aa
AA seq
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MGDFNLALVIVAIVVCVLVLIVNLYLLVNYQHPDDANQAYIPKFIVVLGLSIASISILML
PADVANRQACRHAIYNGFLGKVDFTVRHLSASTQAFPSSWDFSSGQQCVGTGAIQCSAYS
SNAASMTTWTTRTTFPEYIVALTTVAGSIFFTIFGGVGIACLPLGLITAFIHRPKSVITR
SQYIKEATELAKRARELKKAGDGLHQEERSGNKGRRWRKNVKTVEKELLLLEEDVNALEE
MYPQGEQAEATWALTILGYLAKLVLGVLGLIVSVAWVAHIVIYLLIDPPLSAFLNEVFIK
LDDIWGLLGTVAFAVFCFYLLLSVITGAMMIGLKLVFITIHPMKWGATLMNSFLFNVGLI
LLCSISVIQFCATAFGYYAQATAAQEIFGHTLQSLRGIEYLYKYNVFQIGFVVLAGLTFV
YYAAFGWRSKKPSARFQLST
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggggatttcaatttagcattagtgatcgtggccattgtcgtctgcgttcttgtgctt
atcgtcaatctctacctcctcgtcaattaccagcacccagatgatgcaaatcaggcttat
atccccaaatttatcgtcgttttgggcctctccatcgcctccatctccattcttatgctc
cctgccgacgtcgccaaccgacaggcctgccgccacgccatttacaacgggtttttgggt
aaggtggattttactgttagacacctttccgcatccacacaggcattcccatcatcatgg
gacttcagcagtggtcaacaatgtgtcggtactggtgctatacaatgctcagcatattct
tccaatgctgcatctatgacaacatggaccacgcgcactaccttccctgaatatattgtt
gctcttactacagtcgctggatctattttttttactatttttggtggcgtcggtatagct
tgtctcccactgggacttataactgcatttatccaccgaccaaaatctgttatcacacgc
tcccagtatatcaaggaagcaactgaactagcaaaaagggctagagaactgaagaaagca
ggtgatggacttcaccaagaagaaaggagtggcaataagggaagaagatggcgtaaaaat
gtgaaaactgtagaaaaggagttacttcttctagaagaagatgtgaatgctttggaagag
atgtatcctcaaggtgaacaggccgaagcaacttgggctttgactattcttggctacctt
gccaaactggtacttggagttctagggttgattgtttcagtggcttgggttgcacacatt
gtaatatatttgctaatcgaccctcctctatccgcgtttcttaatgaggttttcattaaa
ttggatgatatttggggtcttcttggaaccgtagcatttgcagttttttgcttctatctc
ctgctgtctgtgattactggagcaatgatgattggattgaagttggtttttattacaatc
catcctatgaaatggggagctacacttatgaactcttttctcttcaatgtgggtctcatt
cttctatgctcaattagtgtaattcagttctgtgccactgcatttggatattatgcccaa
gctactgcagctcaagaaatatttggtcatacattgcaatcgcttcgtgggatcgaatat
ttgtacaagtataatgtattccaaatcgggttcgttgttctagcagggctcacatttgta
tactatgcagcttttggatggaggagtaaaaaacctagcgccagattccaactttctaca
taa
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