Salvia hispanica (chia): 125208575
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Entry
125208575 CDS
T09851
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
shis
Salvia hispanica (chia)
Pathway
shis04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
125208575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
shis04040
]
125208575
Ion channels [BR:
shis04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
125208575
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
125208575
NCBI-ProteinID:
XP_047964177
LinkDB
All DBs
Position
2:complement(16869049..16873508)
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AA seq
709 aa
AA seq
DB search
MSFQQEKTVRFQDWRSQGRFDTQSSSRGGVELGRLKSAAYSVSDKFHRGFEYGSERIKRI
TGSLRSFSMGKLKADEKGSVKKMLDPQGSFLQKWNKVFLLSCVVAVSLDPLFFYIPIING
DKRCLELDWKLELIVSVLRSFTDIFYLIHIMFQFRTGFICPSSRVFGRGVLVKNSWEIAK
RYLSSYFIIDILAVLPLPQIVIVIIVPRLKGARSLNTKKLLKIVVILQYIPRVLRIRPLY
KEVTRSSGILTETAWAGAALNLFLYMLASHVIGACWYVLSIERETTCWINACGDESDCRK
ASFNCQLNHAGLPQILNQSCPFQPPDASIFDFGIFLNALQSGVFESQDFPKKFFYCFWWG
LQNLSSLGQNLKTSTYVWEITFAIFISISGLVLFSFLIGNMQTYLQSTTLRLEEMRVKRR
DAEQWMAHRLLPESLRQRIRRYEQYKWQETRGVDEDYLIRNLPKDLRRDIKQHLCLALLK
RVPMFETMDDQLLDAMCDRLKPVLYTEHSYIVREGDPVDEMLFIMRGKLLTVTTNGGRTG
FFNSDILKAGDFCGEELLTWALDPNSSSNLPISTRTVKALVEVESFALMADDLKFVASQF
RRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRCVRKKMEEALGVEENRLQDALAKGGGS
SPSFGATIYASRFAANALRAVRRNAGRKTRVSPVLLLKPAEPDFSAEHK
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgagtttccaacaagagaagactgtcaggtttcaagattggagatcacaaggaaggttt
gatacacaatcctcctctagaggtggggtggaactggggagacttaaatcagctgcatat
tcagtttccgacaagtttcatagaggttttgaatatgggtcggagagaattaaaagaatc
acaggatcactaagatctttttctatgggaaagttgaaagcagatgaaaaggggtctgtg
aaaaaaatgctggatcctcaaggatcatttcttcaaaaatggaataaagtttttcttctg
tcatgtgtggttgcagtctcgctggaccccttgtttttctacataccaattataaatggc
gacaagaggtgccttgagctggactggaaattggaacttatagtttctgttctacggtca
tttactgatatcttttacctcatccatatcatgtttcaattccgtactggttttatttgc
ccttcttctcgtgtgtttggaagaggtgttcttgttaaaaattcgtgggagattgcaaag
agatatctgtcttcctacttcataattgatattcttgcagttctcccacttccacagatt
gtaatagtgatcatcgtacccagattgaaaggtgcaaggtctttgaacacgaagaagttg
ttaaaaattgtggtgatccttcaatacattccaagggttctccgaatccgtcctctatac
aaagaagtcacaagaagttctggcatactcactgaaacagcatgggctggagctgccctc
aatctttttctttatatgctcgctagtcatgtgattggagcctgttggtatgtgctttct
atagagcgtgaaactacctgctggataaacgcttgtggggatgagtctgattgtaggaag
gcttcctttaattgccagcttaatcatgctggactgcctcagattttgaaccaatcttgc
ccttttcagccacctgatgcttccatttttgattttgggatattccttaatgctctacag
tctggtgtttttgaatcacaagattttcccaagaagttcttttattgtttctggtgggga
ctccagaatctaagttctctcggccagaatcttaaaacaagtacctatgtttgggaaatt
accttcgcaattttcatatctatatctggcttggtcctattctcatttctgattggaaat
atgcagacatatctgcagtctacaacactgagattggaggagatgagggtgaaaagacga
gatgcggagcagtggatggctcaccgtctccttcctgagagtttgaggcagcgaataagg
agatatgagcaatacaaatggcaggaaactcggggtgtagatgaagattatctgatacgc
aatcttcccaaggacctcagaagagacataaagcaacatctctgtttagccttgcttaag
agggtgccaatgtttgaaacaatggacgatcaactcttggatgcaatgtgtgatcgtctg
aaaccagtgctgtacacggagcatagctacatagtgcgagaaggggatcccgtagacgag
atgctgttcatcatgcgtggcaaactgttaacagtgaccacgaatggagggcggacaggg
ttcttcaactcagacattctcaaagcgggtgatttctgtggggaggagctgttgacatgg
gctctagaccccaattcatcatccaaccttcccatctcgaccagaacagtgaaggccctt
gtcgaagtagaatcgtttgctctcatggccgacgatctcaagtttgtagcctcccagttc
aggcgactgcacagcaagcagctgcgccacacgtttagattctattcgcagcagtggagg
acatgggctgcttgtttcatacaggcggcgtggaggcgctgcgtgaggaagaagatggag
gaagctctcggtgtagaagagaacaggctgcaggatgcattggccaaaggaggcgggagt
tcccccagcttcggagcaaccatttatgcatcgagattcgcagccaacgcccttcgagca
gtgcgacgcaatgcaggtagaaagacgagggtatcacctgtgcttctactgaaaccagct
gagccagattttagtgctgaacacaaatga
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