Salvia hispanica (chia): 125208716
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Entry
125208716 CDS
T09851
Name
(RefSeq) probable rhamnogalacturonate lyase B
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125208716
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125208716
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
125208716
NCBI-ProteinID:
XP_047964301
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Position
1:complement(49026601..49030893)
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AA seq
663 aa
AA seq
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MGKFKKAIKKLWRCASGTSEACGVGVMSPIGCRWYIQDNHVVLDNGILRVTLSNPDGIVT
GVCYNGIDNMLEVLNDESNRGYWDVVWNALDGSRAGVFEVIKATTFNVIKDSEEQVEVSF
SRPWDPSMQGKLIPLNIDKRFVLLRGSSGFYTYAIYEHVGSPEWPAFSLGETRIAFKLRK
EKFHYMAIADNRRRFMPLPDDRLPNRGQPLAYPEAVLLTNPVEPELKGEVDDKYQYSCDN
KDLKVHGWISMDPPAGFWQITPSDEFRSGGPLKQNLTSHVGPTTLAVFISGHYAGDDLNP
KFGQGEPWKKVFGPVFIYVNSVMDGQDPLTLWDDAKRQMSVEVQSWPYNFPASEDFEKAD
QRGSVSGKLFVADRYVSSDNIPANGAYVGLAPPGDAGSWQRECKDYQFWVRADETGYFSI
NNVRTGNYNLYAWVPGFIGDYKNEAPITITSGGQIDVGEIVYQPPRDGPTLWEIGIPDRT
AAEFYAPDPDPKYVNRLFINHPDRFRQYGLWDRYSELYPNEDLVYTVGKSDYTKDWFYAQ
VNRKKPDNSYQGTTWQIRFVLDTVIPNGIYKLRVAIASASLAELQVRVNNPKANRPLFSS
GLIGRDNSIARHGIHGLYWLYSVDIQSSALVQGDNTIFFTQPRNQSPFQGLMYDYIRLEA
PPQ
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatttaagaaagcaatcaagaaactttggaggtgtgcgtcagggacttcggaa
gcttgtggagttggagtcatgtcacctataggttgtcgttggtatattcaagataatcac
gtggttctagataatggcatactgcgagtcacattatcgaacccggatgggattgtaacg
ggtgtgtgttataacggcattgacaatatgcttgaagttctcaacgatgagagtaaccga
gggtactgggatgtcgtatggaatgcactagatggaagccgggcaggagtctttgaagtg
atcaaagccacgacttttaacgttattaaggacagcgaggagcaagtagaagtgtctttt
tcaaggccatgggatccctctatgcaagggaagcttattccattaaacatagataaaagg
tttgttctgttacggggctcctcaggattctacacctatgcgatatacgagcatgttggt
tcacctgaatggcctgcttttagccttggagaaaccaggattgcattcaaacttcgaaaa
gaaaagtttcattacatggctatagcagataacaggcgcagattcatgcccctgccagat
gaccgactacccaacagaggccagcctctcgcctatccagaggcggtcctactgactaat
cccgttgagcccgaacttaaaggagaagtcgatgacaagtatcagtactcgtgtgacaac
aaggatctgaaggtccatggctggatctccatggatcctcctgccggattttggcaaata
acacctagtgatgagttccgctcaggcggacccctcaaacaaaatctaacctctcacgtg
ggaccgacaacactggctgtttttattagcggtcactatgctggggacgatctgaatcca
aagttcggtcagggagagccgtggaagaaagtattcggccctgttttcatatacgttaac
tccgtgatggatggacaagatccacttacactgtgggatgatgccaagagacagatgtca
gtcgaagtccaaagctggccttacaactttccggcatcagaagatttcgaaaaggcagac
cagaggggtagtgtcagcggtaaactattcgttgcagacaggtatgtcagtagtgataat
attccagcaaatggtgcttatgtgggattagcaccaccaggagatgctggatcatggcag
agagagtgcaaggactaccaattttgggtaagggcagacgagacgggttatttttccatc
aacaatgtccggaccgggaactacaatctttatgcatgggtccccggcttcatcggagac
tataagaatgaagctcccattaccattacatcaggtggtcagatcgacgtgggagagata
gtatatcagcctcctagagatggtccgaccctctgggaaatcgggatccctgaccgtact
gctgcagagttttacgccccggatcctgatcccaaatatgtcaaccggctcttcatcaac
catccagacaggttcaggcagtacggactctgggacaggtactcggagctgtatccaaat
gaagacttggtttacacggttggcaagagcgactacacgaaagattggttctatgcacaa
gttaacaggaaaaagccagacaactcgtatcaggggacaacgtggcagatcaggttcgtg
ctagacactgtcattccaaacggaatctacaaactgcgcgtggcgattgcatctgcatcc
ttagctgagctacaggttcgagtgaacaacccaaaggcgaacagaccgttgttttcaagt
gggctgatcgggagggacaactcgattgctaggcacggaatccacgggctgtattggctg
tacagtgtggacatacaaagtagtgcacttgtgcaaggtgacaacaccatatttttcact
caaccaagaaatcaaagccctttccaaggccttatgtatgattacattcgacttgaagct
cctccacaataa
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