Salvia hispanica (chia): 125208993
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Entry
125208993 CDS
T09851
Name
(RefSeq) general transcription factor 3C polypeptide 3-like isoform X1
KO
K15201
general transcription factor 3C polypeptide 3 (transcription factor C subunit 4)
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125208993
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIC
125208993
TFIIIC, fungi type
125208993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_8
TPR_19
TPR_14
TPR_1
TPR_7
TPR_16
TPR_9
TPR_CcmH_CycH
TPR_12
TPR_11
TPR_21
TPR_Slam
PPTA
TPR_15
TPR_10
ANAPC3
ARM_TT21_4th
HAT_PRP39_C
EST1_DNA_bind
IL6
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
125208993
NCBI-ProteinID:
XP_047964508
LinkDB
All DBs
Position
3:19143808..19151508
Genome browser
AA seq
932 aa
AA seq
DB search
MWLEQLNSIVMEVQSCKARPPAAESCSALNMVEGLDLQEDDEETNEVFEDGEDYNFQLEG
EMDPLSFVEGEDTSRVPLYEVFQQIEDQYKALAMKKRPASHHNESETPAKRLRQEEENAG
ATREEIEEAMNFGVGKRRRRSRKERRRGRRKGTKNKLNPEVTRKLGDATLHYAMGNFDKA
ICLLHEVIRLAPNLSDPYHTLGLIYSATDDNKRAMIFYMIAAHLNPKDASLWKLLFAKSM
EHKDKKQAYYCLNKAIIADPEDIYLQLLRALYHDGNEEYQKAAESYEHIARLCPDNIKDL
QRAAELNQKCKQHERAVSMLEESLKHHKDDAYIGVVNLLVPVLMENNNYARALEHIEHAQ
KVCTAGKQMPLDLITKTGICHIHLGHKEKAEACFNILKQEAAANNPRLIINVADSLMSVG
HPESALTYYLLLEEDSEKYDVWDEEKYPGYLHLQIATCYVSLKQRGQAIEYYNKAIRKLH
DSVDARMTLSSMLLEEGRDDEAISVLSPPVESDPDSKLDTQKLWHHSGKIKLKLSQIYKS
KGLVEAFVDVLLPVIRETLLVEQNQRKARSRPRLTGSVLSQRTEVLKDSNSDRVHIGLPP
LASSAALSKAARAKKVLQKRAALKEAKQAEALAVGCDYNSDDSDDESQQVSMESPLPGFL
NEERNHMLIVDLCKSSLSSLRRCSSALEIVQISLKLEALPVQIKKELRTIGAQALIAGPA
HGWDLVRDFVSRDPYSFSAWNHCYKVILRMNNKLLHSMRVKHRDSVPPILITGHQFTMVS
QHQTAAREYLQAYKLMPDNPLINLCGGTALINLSLGLRLQNKHQTFLQGLAFLYNNLHLC
GDSQEALYNIARAYHHVGLVSLAAQYYEKALATREKDYPIPTLPYENQNATKIKLPGYCD
LRREAAYNLHLIYKQSGAFDLARQVLKDHLVL
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgtggctggaacaattaaattccatagttatggaggtgcagagctgcaaagctcgtcct
ccggcagctgaaagttgttcggctctgaacatggtagaggggctggatctgcaagaggat
gatgaagaaaccaacgaggtttttgaagatggagaagactacaattttcaactcgaagga
gaaatggaccccctgtctttcgttgagggcgaagacacctcgcgtgtgccactctacgag
gtgttccagcagattgaggaccagtacaaggcattggctatgaagaaacgcccggcttca
catcacaacgagagtgaaacaccagctaagagattgagacaagaggaggagaatgctgga
gcgacccgcgaggaaattgaggaggctatgaactttggtgttgggaagaggaggaggagg
tcgaggaaggagaggcgaagaggaaggaggaagggaacaaagaataaactgaaccctgaa
gtgactagaaaacttggtgatgctacacttcattatgcaatgggtaactttgacaaggcc
atttgtctgctgcatgaagtaattcgtcttgccccaaatctgtcggatccatatcataca
cttggtctgatatattctgctacggatgataataagagagcaatgattttctacatgatt
gctgcacatttgaatccgaaggatgcttctttgtggaaacttctttttgcaaaatcaatg
gagcacaaggacaaaaaacaggcttattactgcctcaacaaagcaataatagcagatcca
gaagatatttatcttcaattactccgtgctttgtaccatgatggaaacgaagagtatcaa
aaagcagctgagtcctatgaacatattgctcgcctctgccccgataacattaaagatctg
cagagagcggcagagctgaaccaaaaatgcaaacaacatgagcgagctgttagtatgctg
gaggaaagtctcaagcatcataaggatgatgcttatataggtgtagttaatctcttggtg
ccagttctgatggagaacaataactatgccagagctctcgagcatattgaacacgcacaa
aaggtgtgtactgctggaaaacagatgccactagatttaataacaaaaactggaatatgc
cacattcatcttggtcataaggagaaagcagaggcttgctttaatattttgaaacaagag
gctgcagcaaataatcctcgcttaatcatcaatgtcgcagactcactcatgagcgtcggg
catcctgagtctgcattaacgtattatttgttgttagaggaagactcagagaagtatgat
gtatgggatgaagaaaagtatccaggctacctacacttgcaaattgcgacgtgttatgtt
tctctaaagcaaagaggacaagcaattgaatattataataaagctattcgtaaactccat
gatagtgttgatgcacggatgactttatcatctatgcttcttgaagaaggcagagatgat
gaagcaatttctgtgctttctcctccagtagaatcagatcccgactcaaaattagacaca
cagaagttgtggcaccatagtggaaagatcaagttaaagctttctcagatctataaatct
aaagggttggttgaggcttttgtagacgtgcttttaccagtaattcgtgagacgttgctt
gtcgaacaaaaccaacggaaggccagatcccgtccacggctgactggtagtgttctttca
caaaggacagaagttctgaaagattccaactccgacagagtgcatattggacttcctcca
ttagcttcttctgcagctctttccaaagctgccagagcaaaaaaggtgctccagaaaagg
gctgcactcaaggaagcaaaacaagctgaagcattggctgttggatgtgattataacagt
gatgattcagacgatgaatctcagcaagtgtctatggagtctcctttgccaggctttctg
aatgaagagaggaatcatatgttgattgtagatttatgcaagtcatcattatcttcattg
agaaggtgttcgagtgcactagagattgtacaaatcagcttaaaactagaggcattacct
gttcaaataaagaaggagcttcggactattggagctcaagctttgattgctggtcctgca
cacgggtgggatttagtacgtgactttgttagtcgagacccttacagtttttctgcttgg
aatcactgctacaaagtaatactcagaatgaataacaaactccttcattccatgagagtg
aaacacagagattctgtaccacctattcttattactggccaccagtttactatggtcagt
cagcatcaaactgctgctcgagaatacttgcaagcctataaactgatgcctgacaatccc
ttgatcaacctttgtggaggaaccgccttgataaatttgtcccttggcctccgacttcaa
aacaagcaccagactttcttacaagggctcgcgttcctctataacaacttgcacctttgt
ggagacagtcaggaggcattgtacaacattgctcgggcgtaccatcatgttggccttgtt
tccttggctgctcaatactacgagaaggcactggctacccgcgaaaaggattatcccatt
ccaacgctcccatatgaaaatcaaaatgcaaccaagatcaaattgccaggctattgtgat
cttcgtcgcgaagcagcttacaatcttcacctgatatataagcaaagtggggcatttgat
cttgctagacaggtcttgaaagatcatcttgtgttatga
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