Salvia hispanica (chia): 125209020
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Entry
125209020 CDS
T09851
Name
(RefSeq) truncated transcription factor CAULIFLOWER A-like
KO
K09264
MADS-box transcription factor, plant
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125209020
Transcription factors [BR:
shis03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
125209020
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Paralog
Gene cluster
GFIT
Motif
Pfam:
K-box
SRF-TF
HOOK_N
DUF1192
Membralin
Motif
Other DBs
NCBI-GeneID:
125209020
NCBI-ProteinID:
XP_047964549
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Position
3:complement(45787036..45791348)
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AA seq
251 aa
AA seq
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MGRGKVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALIVFSHKGKLFEYSTD
SCMDRILEKYERYSFAERQLIANEPESPVNWTLEHSKLKARIELLQRNHRHYMGEDLDTM
SVKDLQNLEQQLDSALKTIRSRKNQLLFDSISELQRKEKAIQEENSMLAKKIKYKEKELG
QQAQWEQRNPTTNTAALPPLPPPQPQYLMASRLPSLNMGGGTYDEESEARRNELDLTLDS
LYSCHLGCFAA
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgggtagagggaaggtacagctgaagaggattgaaaacaagatcaacagacaggtgact
ttctccaagaggagggctggcttgctgaagaaagctcatgagatctctgtgctttgcgat
gctgaggtcgctttgattgttttctctcacaaggggaagctctttgagtactctactgat
tcttgcatggacaggattttggagaagtatgaaagatactcatttgcagaaagacagtta
atcgctaatgagcctgagtcgcctgttaattggactctcgaacacagcaaacttaaggcc
agaattgagctcttgcaaagaaatcacaggcactacatgggcgaagatctggacacgatg
agcgtgaaagatctgcagaacttggagcaacaacttgatagtgctcttaagaccatccga
tcaagaaaaaatcagctcttgtttgattcaatctcggagttgcagcggaaggagaaggct
atccaagaggaaaacagcatgctagcaaagaagatcaaatacaaggaaaaggaattgggg
cagcaggcacaatgggagcagcgaaaccccaccactaacacggcagcgctgcctccactg
ccgccaccacaacctcaatacctcatggcatctcgacttccttccttaaacatgggaggc
ggcacatacgacgaagaatcagaggcgagaaggaatgagctcgacctcactcttgattca
ctctactcatgccatctgggatgctttgctgcgtga
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