KEGG   Salvia hispanica (chia): 125209331
Entry
125209331         CDS       T09851                                 
Name
(RefSeq) LOW QUALITY PROTEIN: RNA-binding protein P-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125209331
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:shis03019]
    125209331
   03041 Spliceosome [BR:shis03041]
    125209331
Messenger RNA biogenesis [BR:shis03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     125209331
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     125209331
Spliceosome [BR:shis03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    125209331
SSDB
Motif
Pfam: RRM_1 RRM_7 Cytochrom_B558a Cut8
Other DBs
NCBI-GeneID: 125209331
NCBI-ProteinID: XP_047964890
LinkDB
Position
3:13777642..13780895
AA seq 558 aa
MILLLSKNINCKKRYICLSPGSNRGPLVCETSVITDYTTQTVLVFIITILTLFQYFLLMS
CLXISKVLSAVSFAIAVMTRTKQSKRKPSNQEPPATPKIHKKIKKQKKSKPPKPVVHVSE
SGSDSDSVPPSDPSTEIQTLLEPFSKEQLISLVIELSSSDEHIFSLVKAAADQDIGHRKI
FIHGLGWDATRELVESIFGAYGEIEDLNVVADRETGKCKGYAFLTYKSFESVKKLLKNPR
VQVGNRLTSCQLASEGPPGPAAAGIVSQKQFSASDYPQRKIYVSNVPLNASPERLLAFFE
KFGEIESGPKGMDPETGRFKGYAIFVFKTLEGAKKVLEEPVKFFEGGQLHCKKAAEGKGQ
VASGAASITTALQPVQPQMLAAVAAAQQVQNMALLGQQAGLVNPLYGGGLIGNANLGGYY
GMLGGGQGLGLGAYGVSGGGNSVPGLGSYGVSSGGNSVPGLGAYGVSSSGNSVPGLGAYG
VSGGSNSVPGLGAYGVSGGGNSVLGLGAYGVSGGGNSVTSGAMLQGLQFAYPGLQNGQSS
STLPKTPGAGGSSYSQKQ
NT seq 1677 nt   +upstreamnt  +downstreamnt
atgatactgttgttgagcaaaaacataaattgtaagaaaagatatatatgtctgagcccg
ggttcgaaccggggacctctagtgtgtgagactagcgtgataaccgactacaccacccag
accgtgttagtattcatcataacaatattaactttattccaatacttccttctaatgagt
tgtctataaatatctaaggttttgtcggcagtttcattcgcgatagcagtaatgacgaga
accaagcagtctaaacgaaaaccctcaaatcaggagccgcctgcaactcccaaaatccac
aaaaaaatcaagaagcagaagaaatccaagccccctaaacccgtggtccatgtttctgaa
tctggttctgattcagattcagtcccaccttccgatcccagcaccgaaatccaaacccta
ctagaacctttctccaaggagcagctcatctctctcgtaatcgagctttcctcttccgac
gaacacatcttctccctcgtcaaagccgccgccgaccaggacatcggccaccgcaaaatc
ttcatccacggcctcggctgggacgctacccgcgagttagtcgagtcaatttttggggct
tacggcgaaattgaggatctcaatgtggttgctgatagggaaaccggaaaatgcaagggt
tacgctttcctcacctacaaatcattcgaatccgtgaaaaaattgttgaaaaaccctagg
gttcaggtggggaaccgtttgacctcgtgccagctggcgtcggagggcccaccgggccct
gccgccgccgggattgtttcgcagaagcaattctccgcgtcggattacccgcagcggaag
atttatgtgagtaacgtgccgctgaatgcgagcccggagaggctgttggctttttttgag
aaatttggggaaattgagagcgggccgaaggggatggatccggagacggggagattcaaa
ggctatgcgattttcgtgtttaagacgctggagggggctaagaaggtgttggaggagcca
gttaagtttttcgaagggggtcagctgcattgcaagaaggcggcggaggggaagggtcag
gtggctagtggcgcagcgtcgataacgactgctctgcagccggtgcagccgcagatgctg
gctgcggtggcggcggctcagcaggtgcagaatatggctttgctggggcagcaggcgggg
cttgtgaatcctttgtatggtggtggattgattggtaatgcgaacctgggtgggtattat
gggatgctagggggtggtcagggcttggggttaggggcctatggtgtttctggtggtgga
aatagtgttccgggattaggttcctatggagtttctagtggtggcaatagtgtgccggga
ttaggtgcctatggcgtttctagtagtggcaatagtgtgccgggattaggcgcatacggt
gtatctggtggtagcaatagtgttccgggattaggtgcctatggtgtgtctggtggtggc
aatagtgttctgggattaggcgcttatggtgtatctggtggtggcaatagtgtgacgagt
ggggcgatgcttcagggattgcaatttgcttatccaggtttgcagaatggacaatcttct
tctaccttgcctaagactccgggggctggtggaagcagttactctcaaaaacaatga

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