Salvia hispanica (chia): 125209498
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Entry
125209498 CDS
T09851
Name
(RefSeq) serine/arginine-rich splicing factor RS31A-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125209498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125209498
Spliceosome [BR:
shis03041
]
Common components
Common spliceosomal components
SR proteins
125209498
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
Phospholip_A2_2
RNA_bind
RRM_8
RRM_Nup35
SET_assoc
Motif
Other DBs
NCBI-GeneID:
125209498
NCBI-ProteinID:
XP_047965053
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All DBs
Position
3:complement(28284110..28287011)
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AA seq
263 aa
AA seq
DB search
MVEWATDECCRHHDGSESKTRPNKTLFVIHFDLTRTRDHDIKSHFERYGRVLNVSMRQNY
AFVQFETQENATEALKRTHGSKIFDRIISVGYAFRRADEKGSREGSPPRGENGRRRNDAS
LRSSIPACRHGRTGPDYGLVQGTDYDRRCDGPSKPSRAQASHVYDRYKGPSNPRARILDR
VRARPVYDRYNGPSNQRARRTDRGRASRVYDRYGDPSNPRAKSPARDMKNKCVFLLYLRI
SLQSGLCTCAAPLSSAVRACVQE
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atggttgaatgggctacggatgagtgctgtaggcatcatgatggttcagaatcaaaaaca
agaccaaataaaaccctttttgtgatacactttgaccttactcgtactcgagatcatgac
ataaaaagccattttgagcgctatgggagggttcttaatgtatccatgcgtcagaattat
gcttttgtgcaatttgaaactcaggaaaatgccacagaagctctgaagcgcacccatggg
agtaagatattcgatagaattatttctgttggttatgctttccgacgtgctgatgaaaag
ggcagtagagagggtagcccccctagaggggaaaacggaaggcgtagaaatgatgcttcc
ttaaggtcatccattccagcatgccgccatggtcgaacaggtcctgattatgggttggtt
caaggcacagattatgataggaggtgcgatggtccttcaaaaccatcccgtgcacaagca
agtcatgtttatgataggtacaaaggtccttcaaatccaagggccaggattcttgaccgt
gtgcgtgcaaggcctgtttatgataggtacaatggtccttcaaatcaaagggccaggcgt
actgaccgtgggcgagcaagtcgtgtttatgataggtacggggatccttcaaatccaagg
gctaagagtccggcgcgtgatatgaagaacaaatgtgtcttccttttatatctgcgaatc
tctctgcaatcgggactgtgcacgtgtgcagccccgctgtcatctgctgtgcgtgcgtgc
gtgcaagaatag
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