Salvia hispanica (chia): 125209624
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Entry
125209624 CDS
T09851
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125209624
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125209624
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
DUF424
Motif
Other DBs
NCBI-GeneID:
125209624
NCBI-ProteinID:
XP_047965171
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All DBs
Position
3:complement(22854958..22859894)
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AA seq
689 aa
AA seq
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MEKSSRPSIQRWLLMMLSCFFLLTMIHAHRSPPPVKLHVTEEHVEIDNGIVKITLSNPTG
MITSLGYKNITNILEYRFVEGRRGYYDIMWSKPDHNESYFDRLDCQSFRIIVETDDQVEL
SFTRTWHHFLDGEVPLNIDKRYIVLRGSSGFYSYANLEHMEGWPDLNIYEARIAFKLHQD
MFHYMVISDDKQRMMPTDMDLKTGQHLSYKEAVWLTNSSNPRLRGEVDDKYQYSCDNKDN
RVHGWISSKSNLKIGFWVITPSDEFRAGGPVKQDLTSHASSTSLAIFFSVHYAGEDFGVR
LRDGERWNKVFGPVFMYLNSDSDSTSIWEDAKRQAAQETKNWPYDFPLSRDFPHSNQRGV
VTGRLFVKDRAITPAISAYVGLAQPGDAGSWQTNSNGYQFWSQSDKRGHFSIKGVREGIY
NLYAWVPGVIGDYKHHADIIVQPGSQVGMGNITYTPPRNGPTLWEIGIPDRTAAEFYVPD
PAPHLVNRLYVNHTEKYRQYGLWERYTDLYPDQDLIYTVGVSDYHRDWFFAHVNSYVPTV
WRIVFNTSEVIRRGRYTLRIALASSNMAEIQVRINKFKGTRPHFSTGLIGKDNAIARHGI
HGLYRLYNVTVLGSQLVEGTNTIYLRQSRPSSPFIGVMYDYIRLEAPACASTNTTCVSNA
SWISNSLLFNLLLIYIFHFLASTFHPLIN
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggagaagagttcacggccatcgattcaacgctggcttcttatgatgttgtcttgcttc
ttccttcttaccatgattcatgcacataggtcaccaccacccgtcaaactccacgtaacg
gaagaacatgtggagatagataacggcattgttaaaatcacgttgtctaatccgaccggc
atgatcacaagcctcgggtacaaaaacatcaccaatattcttgaatatcgctttgtagaa
gggcgaagagggtactatgatattatgtggagtaagccagatcacaacgaaagttatttt
gacagactcgactgtcagagctttagaattatagtagaaacagatgatcaagttgaactt
tcttttacaaggacatggcatcacttccttgatggagaagtgcctctcaatattgataag
aggtacattgtcctgcgtggatcatcaggtttctactcatatgcaaatttagagcatatg
gaaggatggcccgatctaaacatatatgaagcaagaatcgccttcaagcttcaccaagac
atgtttcattacatggtaatatccgacgataaacaaaggatgatgccaacagatatggat
ttgaaaacaggccaacatcttagttacaaggaagctgtttggttaacaaattccagcaat
ccacgactgagaggagaggtggatgataagtatcagtactcgtgtgacaacaaggataac
cgcgtgcacggatggattagttcaaaatccaatctgaagattgggttctgggtgataacg
cctagtgatgagttccgagccggtggtcctgtcaaacaagatctcacttcgcacgcttcc
tctacttccctggctatattctttagtgtgcattatgctggtgaggattttggagtgaga
ttacgtgatggagagcggtggaacaaagtgttcggccctgttttcatgtacctcaactcg
gactcagattccacatcaatatgggaagatgctaagagacaggctgcccaagagaccaag
aattggccttacgattttccattgtcccgagattttccccattccaaccaacgaggcgtt
gtcacaggccgattatttgtcaaagaccgggcaattacaccagcaatttcagcatatgtg
ggattggcccaacctggagatgctggatcttggcagaccaactctaacggctatcaattt
tggagccaaagcgacaaaaggggccacttcagcatcaaaggtgttagagaaggcatttac
aacttgtacgcgtgggtgccaggagtcatcggagactataaacaccatgctgatattata
gtccaaccaggaagccaagttgggatgggtaatattacgtacactcctccaagaaatggt
ccgactctctgggaaatcgggatccctgatcgaactgcagctgaattctacgttcctgat
ccagcccctcatctagtaaacagactatatgtgaaccacacagaaaagtataggcaatat
ggtttgtgggagagatacactgatttatatcctgatcaggatttaatttacactgtcgga
gtgagtgattatcatagggactggttttttgcccatgtaaatagctatgtaccaacagta
tggcgaattgtgttcaacacaagtgaggtgattaggagaggacgttacacgcttcggatt
gcattggcatcttccaacatggcagaaatccaagtacggatcaacaagttcaagggcact
cgcccccatttctcgacaggattgattgggaaagacaacgcgattgctaggcatggtatt
catggtctgtacagactatacaatgtgactgtattgggatctcaattagtggaaggaaca
aacacaatatatctgaggcagtcacgtccttcatcgccattcatcggcgtcatgtatgac
tacattcgcctcgaagcccccgcatgcgcctcgacaaacaccacgtgtgtttccaatgca
tcctggatttcgaattctctgctttttaacttgcttttaatttatatctttcactttctt
gcttctacctttcatccattaatcaactag
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