Salvia hispanica (chia): 125209916
Help
Entry
125209916 CDS
T09851
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125209916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125209916
03036 Chromosome and associated proteins [BR:
shis03036
]
125209916
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125209916
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125209916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
125209916
NCBI-ProteinID:
XP_047965450
LinkDB
All DBs
Position
3:33550028..33558402
Genome browser
AA seq
1029 aa
AA seq
DB search
MIADAFGQSSSSPFGSQPVFGQTSSATNNPFAPKPFGGNTSPFGSQTGGSIFGGMSTGVF
GAPSSSPFGSTSVFGASSSPAFGSATPTFGASTGSAFGNTSSAFGGSSVFGQKPTFGGFG
SNTTQSSPFGGSFQQSQPASGSNLFGSSTPFGAPSQPAFGASSSPAFGAPSTPAFGATST
PAFGSTASPTFGSTSGGFGVSSSPFGSSTPAFGASSTPAFGASSTPAFGATAAPAFGATS
SPAFGATTSSAFGASSTPSFNFGSSPAFGQSTSAFGQSTSAFGSSPFGATSSFGAQSTSF
GAQTTTPAFGNSGFGQTAFGGQRGGSRVTPYSATSETDGATGTQPAGKLESISAMPVYKD
KSHEELRWEDYQLGDKGGPAPVGQATAASGFVSPFSATPTPSFGQSSANPFSSSTPSNLF
APKTPAFNNSGFAPSTGSAFSSSPFPTANTASPFGSTSSTTTSLFGAAPQPFGANTSPSL
FNSSSPSPFGSPSIFGSSSSQGTGTTFGTSLGFGNTQSSPLFQSTTPTLGQSSSPFGQTS
AFGQTSTFGQSNLFSTPSTGFSGNLFSSSSSLPSSTGGALGFGQTTPSLSTPFQSGQPAP
GSFNFSNFGQSQPAAPSGFTGTPGMFSNTSFGQAPGTQTTVAAQAAPITNPFGTLPTVPQ
VSIGRAGISPSVQYGISSLPVVEKPVPVRISSLLTSRHLSQRRVKLPVRKYHPKSNGPKV
PFFNDDEETASTPKADALFVPRENPRALVIRPLEQWHSRSSAEKTKTTGTPMRENGELHH
DGYNSINGNRNKDKDASPREDLVENGLAKEQADPVKGNQKANGVHDGLSTEKGDSYTALT
GHRAGEAAIVYEHGAGIEALMPKLRHSDYYTEPRIQELAAKERAEPGYCRHVKDFVVGRH
EYGSIKFFGETDVRRLDLESLIQFNNREVIVYMDESKKPPVGQGLNKPAEVTLLNIKCFD
KKTGQQYVEGPRIGKYKEMLKRKAEDQGAEFVSYDPVKGEWKFRVNHFSAYKLGDDEDES
YENVLNCFS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgattgcggatgcttttgggcagtcgtctagtagcccattcgggtctcaacctgttttt
gggcaaactagtagcgctactaacaacccttttgcccctaaaccttttggtggaaatacc
agcccttttggctcacagacagggggttctattttcggcggcatgtctactggtgttttt
ggtgccccatcttcttctccttttggatccacttctgtttttggtgcatcatcatcacct
gcttttggaagtgcaaccccaacctttggagcttccacaggttctgcatttggaaacaca
tcttcagcatttggggggtcctctgtatttggacagaagcccacatttggtggttttgga
tctaatactactcaatcaagtccctttggaggttcatttcagcaatcacagcctgcctcc
gggagcaatttatttggctcatctacaccttttggtgctcctagtcaacctgcctttggt
gcgtcaagtagtcctgcatttggggcacccagcactccagcttttggtgcaaccagcacc
cctgcctttggttcaactgcaagcccaacatttggcagcacaagtggtggctttggtgtg
tcaagttctccttttggatcaagcactccagcatttggtgcttcttccactccagcattt
ggggcttctagcacgccagcttttggtgccacagctgctcctgcttttggtgcaacaagc
agtccggcgtttggtgccacaacctcttccgcatttggtgcttcaagtactccgtcgttt
aacttcggatcaagtcctgcatttggccaatcaacatccgcatttggacaatcaacttct
gcatttggaagtagtccatttggtgcaacatcatcctttggagctcaaagtacttcgttt
ggagctcagactacaacgcctgcatttggtaactcaggatttggccagactgcttttgga
gggcaacggggtgggagtagagtaactccatactcagcaacatccgagacagatggcgcc
acaggtacacagcctgctggaaagctagaatctatctcagccatgccggtctataaagat
aaaagccatgaagaacttagatgggaggactaccagttaggagataaaggaggcccagct
cctgtcggtcaggctactgctgcttctggctttgttagtccattttcagccacacccact
ccttcattcgggcagtcatccgcaaatcccttttcatcttcaacaccttccaatctattc
gctccaaaaacaccagcgtttaacaattcaggctttgcaccttcaactggttctgccttt
agttcttcaccttttcctacagcaaatacagctagcccttttggctccacatcatcaaca
acaacctccttatttggtgctgcacctcaaccatttggagccaatacctctccttctctt
tttaactcttcaagcccatctcctttcggatcaccatctatttttgggtcttcatcgtca
caggggactggaactacatttggtaccagcttggggtttggtaacactcagtcttcccca
ttattccagtcaacgacgcctacacttggacagagcagttcaccttttggacaaacatct
gcatttggtcaaacatcaacttttggacagtcaaatcttttttctacaccctctacgggt
tttagtggaaatctgttttccagcagttcatcacttccaagcagcactggcggcgccttg
ggatttggtcaaacaactccttctctttctactccatttcaatcggggcagccggctcct
gggagcttcaacttcagcaattttggccagtcacaaccagctgctccaagtggctttact
ggcacccctggcatgttcagcaatacttcttttggacaagcgccaggcacacaaaccaca
gttgctgcacaagcagctcctattacaaatccctttggaactttacctacagtgcctcag
gtgtcaattggtcgcgcagggatttccccttctgttcagtatggtatttctagcctgcca
gttgttgaaaaaccagttcctgtaagaatatcatctcttttaacatctcgacacctctcc
caaaggcgtgtaaagcttccagttaggaaatatcaccctaaatccaatggcccaaaggtg
cctttctttaatgatgatgaagaaacagcaagcacgccaaaagcagatgctctgtttgtg
ccaagggaaaatccaagagctctagtgattcgtccactggaacagtggcattctagatcc
agtgcggagaaaacaaagaccactggcactcccatgcgtgaaaatggtgagcttcatcat
gatggctacaattccataaatgggaacaggaacaaggacaaagatgcttccccaagagaa
gatttggtggaaaatggtctggctaaagaacaagctgatcctgtaaaagggaaccagaaa
gctaatggtgtccatgatggtctttccacagagaaaggtgactcgtacacagctcttaca
gggcatcgagctggtgaagctgctatagtttatgagcatggagctggaattgaggcgctg
atgccaaagctccgccactctgactattataccgagccacggatccaggagttggctgca
aaggaaagggctgagccaggctattgtcgccatgtgaaggattttgtagtgggaaggcat
gaatatggtagcatcaagttctttggggaaactgatgtgcggaggctagatctcgagtct
ctgatccaattcaacaatcgtgaggtgatagtttacatggatgagagcaagaaacctccc
gttggacaaggtctgaacaagcctgctgaggttacactcctgaacataaaatgcttcgat
aagaagacaggtcagcaatatgtggaggggccaagaattggcaagtacaaagagatgctg
aaaagaaaagctgaggatcaaggtgctgagtttgtttcttatgatccagtgaaaggagaa
tggaagttcagagtcaaccatttcagcgcatataagcttggcgatgacgaagatgaaagt
tatgaaaacgtgcttaattgttttagttga
DBGET
integrated database retrieval system
