Salvia hispanica (chia): 125210016
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Entry
125210016 CDS
T09851
Name
(RefSeq) RING-H2 finger protein ATL78-like
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125210016
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125210016
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
125210016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
FANCL_C
Prok-RING_1
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
125210016
NCBI-ProteinID:
XP_047965548
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Position
3:complement(45615216..45616176)
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AA seq
209 aa
AA seq
DB search
MAAASTSLITHSRRLLLNPLFLSPPSAPPPSTPTHPLRDTSNFDANVVMVLSVLLCALIC
SLGLNSIIRCALRCSTLVSADAEGAPAPAARLANTGIKKKALKTFPIISYAAELKLPGLD
TECAICLSEFAPGERVRVLPKCNHGFHVRCIDRWLGSHSSCPTCRHCLIQTCQKIVGCSQ
SASTPVVNQEVAVRIEPLNPEGLIRNHGT
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgcatcaacttctctcatcacacattcaagaaggcttctcctcaaccctctc
ttcctcagtcccccctcagcccccccaccctcaacaccgacgcatcctctcagagacacc
agcaacttcgatgcaaacgtggtgatggtgctctccgtcctcctctgcgccttgatctgc
tccctcggcctcaactccatcatccgctgcgctctaaggtgctccaccctcgtctcagcc
gacgcagagggggctccagcccccgctgcccggcttgccaataccgggattaaaaagaag
gccctcaagacatttcccatcattagctatgcagctgagctgaagctacctggcttggac
accgagtgcgccatctgcctctccgagtttgcacccggggagcgggtgagggtgctgcct
aagtgcaaccatggcttccacgtccgctgcattgacagatggcttggctcgcactcctcc
tgccccacctgcaggcactgcctcattcaaacctgccagaagattgtaggctgcagccag
tctgcttccacacctgttgtgaatcaagaagttgctgtcaggattgagcctctgaatcca
gaaggtttgattaggaatcatgggacttag
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