KEGG   Salvia hispanica (chia): 125210452
Entry
125210452         CDS       T09851                                 
Name
(RefSeq) pre-mRNA-splicing factor SPF27 homolog
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
shis  Salvia hispanica (chia)
Pathway
shis03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    125210452
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:shis03041]
    125210452
   03400 DNA repair and recombination proteins [BR:shis03400]
    125210452
Spliceosome [BR:shis03041]
 Complex B
  Other components
   Prp19 complex
    125210452
 Complex C
   Prp19-CDC5 complex
    125210452
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    125210452
SSDB
Motif
Pfam: BCAS2 Spectrin
Other DBs
NCBI-GeneID: 125210452
NCBI-ProteinID: XP_047965966
LinkDB
Position
1:complement(48321227..48324026)
AA seq 249 aa
MATDNGDILMLEAPPQPEPAPAPAAPIIDALPYIDDDYSNPKVKEEVDRLVEEEMRLSSK
KPSDFLKELPPLPTFNFQDHPMLAKEYERVRAGRPPVQMDTSRYGLDVPPVNKRNDETAW
RQAVQKAQRLLQHQVIRLENLDLMLKHGPDVWKLYNQQLEAFLSRMQSQVLELNGHIESV
NRERKYHQQNTAYELTALSAQWKELCLKNIEIESACAEIEAHAEAVKIEAAKRGWNLEAN
VENGTIAGS
NT seq 750 nt   +upstreamnt  +downstreamnt
atggcgactgataatggcgacatactgatgctagaggcgccaccgcagccggagccggct
ccagcgccggcagctccaataattgatgctttgccgtacattgatgacgactatagcaat
ccgaaggttaaagaagaggtcgaccgattggtggaagaggagatgcggttaagctctaag
aagccttccgatttcctcaaagagctcccccctctccccacattcaactttcaggatcat
cctatgcttgcaaaggaatatgagagagttagagctgggagacccccggtccaaatggat
acatccagatatggacttgatgtgccaccggtgaataagcgaaacgatgagactgcatgg
aggcaagcagttcagaaagcccagcgcctgttgcagcatcaagtgatcaggcttgaaaat
ctggatttgatgctgaagcatggtcctgatgtttggaagttgtataatcaacagttggag
gcatttctgtcaagaatgcaatctcaagttctggagctcaatggacatattgaatctgtc
aatcgagagaggaagtatcatcagcaaaacaccgcctacgagctcactgctttatctgca
caatggaaggagctctgtctaaaaaacattgaaatagaaagtgcatgtgctgaaattgaa
gcccatgctgaagcagtaaaaatcgaagctgccaagaggggatggaatttggaggcaaat
gttgagaatggaactattgcaggaagctga

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