Salvia hispanica (chia): 125210504
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Entry
125210504 CDS
T09851
Name
(RefSeq) rhamnogalacturonate lyase B-like
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
125210504
Enzymes [BR:
shis01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
125210504
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Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Acb1
Motif
Other DBs
NCBI-GeneID:
125210504
NCBI-ProteinID:
XP_047966008
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Position
3:complement(53435218..53439220)
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AA seq
670 aa
AA seq
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MANLPERDGWDFIIWRLALVGHLLFPLASSQDFDRPMTLEENIEAVLPSNGILMVVLTNR
LVNLTLSIPDGMVTGVTYKGSANLLNTKNKEDNRGYWNVVWNKPGNQTIIDKFPGTSYKI
VMQSKDQTEISFTTTWAVGNSRVPLNVDKRYVLLRDSPGFYTYTVLERLKEWPAFLIQEG
RIVFKLQEDKFHYMAMSDERQRVMPMPEDRRIEIAKPLAYPEAVLLADPSNPQLKGEVDD
KYLYSCDNKDNKVHGWVSSDLGLGFWMITPSNEFKTGGPFKQDLTSHVGPTLLSMFMSTH
YVGGDIAIKLEAGEYWKKVLGPVYVYLNSDTKAKTKPSILWNDAKQRMNEEVASWPYNFP
LSPDFVKSEERGIVSGQLFVRDRFKHKEPLGGASALVGLGPPGPAGSWQLENKGYQFWTE
ADENGNFLIKNVIPGTYSLFASVPGTIGDYKHAFDIIVSPGSNVVVSDVVFDAPRNGPTL
WEIGIPDRSAAEFFIPDPSPQFKIHHYPRPVEKFRQYGLWTRYKDYYPHIDLVYIVGRSN
YSTDWFFVHSTKNIEGYDYKGTTWQIQFDLKDVRKEANYTLQIALASANGAELQVHVNNP
NWKPQFSTGMIGRDNALARHGIHGLYHLYSIGIPGTLLVDGNNTIFFSQTRNVGPFRELM
YDYIRLEGPA
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggctaatttgccggagagggatggatgggacttcattatttggaggcttgcgcttgtt
gggcacctattatttccacttgcctcatcacaagattttgatcggccgatgactttggaa
gaaaatattgaagctgtgttgccatccaacgggatcctcatggttgtattgactaataga
ttggtcaacctcacattgtcaataccagatggtatggtcactggtgtgacatacaaaggg
agtgccaatttgctcaataccaaaaataaagaagataatagggggtattggaatgttgtt
tggaacaagccgggcaatcaaaccatcatagataagtttccaggaacaagctacaaaatt
gtaatgcaaagcaaagatcaaacggaaatcagcttcaccacaacatgggctgttggaaat
tcaagagttcctttaaacgttgataaaagatatgtactgctacgagattctcctgggttt
tatacatacactgtgctggagcgattgaaggaatggccggcttttctaatacaggaaggg
agaatcgtgttcaagctacaagaagacaaatttcattacatggcaatgtcggatgagcga
cagagggttatgccaatgcctgaggatcgacgtattgaaattgctaaacctcttgcctat
ccggaagctgttctcttagccgatccatcaaatccccagcttaaaggagaggtggacgat
aagtacttgtattcgtgtgataacaaagataacaaggtccatggatgggtgagcagtgat
ttgggccttggattttggatgattactccaagcaatgagtttaaaactggtgggcccttc
aagcaggatctcacttctcatgttggcccaactcttctttctatgtttatgagcacacat
tatgttggaggggacatagctatcaagttggaggcaggggagtactggaaaaaggttttg
gggccagtttatgtttatttaaattctgataccaaagccaagaccaagccttctattctt
tggaatgatgctaaacaaaggatgaatgaggaggtggcttcatggccttacaattttcct
ctttccccagactttgttaaatcggaggaaaggggaattgtgagtggtcaattatttgtc
cgtgacaggttcaaacataaggaacctttgggtggggcctctgctttggtgggattgggc
ccacctggaccagcaggctcatggcagttagaaaataagggttaccaattttggacagaa
gcagatgagaatgggaatttcttgatcaagaatgtgatacctggaacatacagcttgttt
gcatcagttcctggaaccattggagattacaagcatgctttcgatatcatcgtttctcct
ggatccaatgttgttgtaagcgatgtggtttttgatgctccaagaaatggccctacactg
tgggagatcggaattcctgatcggtccgcagctgaattcttcattccagatcctagtcca
caattcaagattcatcactacccacgccccgttgaaaagttcagacaatatggactatgg
acgcgttataaggattattatccccacatagacttggtctacattgttggacgaagcaac
tactccacagattggtttttcgtccactccaccaagaatattgaaggctatgattacaaa
ggaacgacgtggcaaatccaattcgacctaaaagatgttagaaaggaggcaaactacact
ctccaaatagcacttgcatcggctaatggggctgaactacaagtacatgtgaacaatcca
aactggaagcctcaatttagcacaggaatgattggcagagacaatgcgctagcaagacat
ggaattcatgggttgtaccatttgtacagcattggaataccagggaccttacttgtcgat
ggaaataatacaatattttttagtcaaacaagaaatgtagggccttttagagaacttatg
tatgattacatacgtttagaaggacctgcttga
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