Salvia hispanica (chia): 125210542
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Entry
125210542 CDS
T09851
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125210542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125210542
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125210542
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
125210542
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
125210542
NCBI-ProteinID:
XP_047966043
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All DBs
Position
3:54842773..54845011
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AA seq
328 aa
AA seq
DB search
MQQVAYIREGEYEQKWAAKGRVRGVRKAKCERKAFTFGYSSTEESGEEGENVQQQPTPRN
GDVSQPSGSDTSSGSISVTLTDPDVLDCPICYVPLCSPVYQCENGHIACASCCTTMKNKC
ASCCWPIGYNRCRAIEKVLESVRVACRNLPRGCLQKFSYSKKLAHEKICNFAAISCPHTG
CDFASFSKSVYAHFALKHSQISKLFCFNEVISLSLDKDQKHVFLQEKNMNTVFILNRTVE
TVGSFVNVVCIAPAAAKKAYLFDLTATVGESSIKLKSVVDVMPKWMAETPAESPTKLYLI
VPKAFISISGVMKLELKIFRDVHHNYIL
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaagttgcctacatacgagaaggagaatatgagcaaaagtgggcagctaaagga
agggtgagaggagtgcgaaaggctaagtgtgaaagaaaagcgtttacgtttggttattcc
tccacggaagaatcgggtgaagagggagaaaatgtacaacagcaaccaactccacgaaac
ggcgacgtatcacaacccagtggaagtgatacctccagtggctccatttccgtcacccta
acggatcctgatgttctcgattgccccatttgctatgtccccctctgctcgcccgtttat
cagtgtgagaatgggcatatagcatgtgcatcatgctgcaccacaatgaagaacaaatgt
gcaagttgctgctggccaattggatacaaccgctgcagggccatcgagaaggtacttgaa
tcagtgagggttgcatgtcgaaacttgccacgtggctgcttgcagaaattcagttacagt
aagaagcttgctcatgaaaagatatgcaattttgctgctatttcatgccctcatactgga
tgtgactttgctagcttctccaagtctgtgtatgcgcactttgctctgaaacattcacag
atctccaaactattttgtttcaatgaggtgatctcactctcattggacaaagatcagaaa
catgtttttctgcaagaaaagaacatgaacacagtattcatcctcaaccgtactgttgag
actgtggggagttttgtgaatgttgtttgtattgcaccagccgcagcaaagaaagcatat
ttatttgatctaacagctactgttggagagagctcgatcaaattgaaatcagttgtggat
gtcatgccaaaatggatggctgaaaccccggccgaatcccctacaaaattatatctcata
gttcctaaagcttttattagcataagtggagtgatgaaattagaacttaaaatatttagg
gacgtgcatcacaattatatcttgtag
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