KEGG   Salvia hispanica (chia): 125210623
Entry
125210623         CDS       T09851                                 
Name
(RefSeq) ubiquitin receptor RAD23d-like
  KO
K10839  UV excision repair protein RAD23
Organism
shis  Salvia hispanica (chia)
Pathway
shis03420  Nucleotide excision repair
shis04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    125210623
  09124 Replication and repair
   03420 Nucleotide excision repair
    125210623
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:shis03051]
    125210623
   03400 DNA repair and recombination proteins [BR:shis03400]
    125210623
Proteasome [BR:shis03051]
 Eukaryotic proteasome
  Proteasome interacting proteins (PIPs)
   UBL-UBA shuttle proteins
    125210623
DNA repair and recombination proteins [BR:shis03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      125210623
SSDB
Motif
Pfam: UBA XPC-binding ubiquitin UBA_7 Rad60-SLD CUE UBA_RAD5A UBA_3 Dsc3_N NQRA_N SAP130_C
Other DBs
NCBI-GeneID: 125210623
NCBI-ProteinID: XP_047966120
LinkDB
Position
3:complement(36404192..36407605)
AA seq 388 aa
MKIFVKTLKGTSFEIEVKPEDKVENVKRIIETTQGADVYPAALQMLIHQGKVLKDGTTLD
ENKIAENAFVVIMLSKNKVSQGEGSTTSSAPTVKAPRSGESQPTSAPVSTTPQPPVAVPS
LAPVSVPAPAAVPSPAPVSAANAVSDVYGQAASNLVSGNNLEGTIQQIIDMGGGIWDRDT
VVRALRAAFNNPERAIDYLYSGIPESAEAPAAPGGTAVNVPAQPQEAVQAAPDLASGPNA
DPLNLFPQGLPNMGPNAGGANTLEFLRNTPQFQALREMVQANPQILQPMLQELGKQNPQL
VRLIQDHQADFLRLINEPIEGDEGNVEGQLPAAMPQAVTVTPEEREAIERLESMGFDRAI
VLQVFFACNKNEELAANYLLDHIHEFEE
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaagattttcgtgaagacgctcaagggcaccagcttcgaaatcgaagtgaaacccgaa
gacaaggttgagaatgtgaagagaatcatagaaactacgcagggagccgatgtttatcct
gcagcactgcaaatgcttatccatcaaggaaaagttcttaaagatggcacaacacttgat
gagaataaaattgctgaaaatgcgtttgttgttattatgctgtcgaagaacaaggtctct
caaggtgaaggctcaacgacatcaagtgcacccactgtgaaggcacccagatcaggtgaa
tcacagcctacttcagctccagtatcaacaacccctcaacctcctgtggctgtgccttca
ctcgctcctgtttctgttccagctcctgctgctgttccttctcctgctcctgtttcagct
gccaatgctgtgtcggatgtttacggacaagctgcatctaatctagtatcaggtaataac
cttgagggtactatccagcagattattgatatgggtgggggaatttgggacagagacaca
gttgtgcgagctcttcgtgctgctttcaataacccagagagagcgattgattatttatat
tctgggatacctgaatcagctgaagcccctgctgcacctggtggaacggctgtcaatgtg
cctgcacaacctcaggaagctgtgcaagcagcacctgatcttgcctctggaccgaatgcg
gatccactaaatcttttcccacagggtctcccaaatatgggtccgaacgctggtggtgca
aacaccctagagtttctacggaacactccacagttccaagcactgagggagatggtgcag
gccaaccctcaaatcttgcagcccatgcttcaagagctcggaaagcaaaatcctcaatta
gtgaggctgattcaagaccaccaagcagactttcttcgcctgatcaatgagcccatagaa
ggcgatgaaggcaatgtagaggggcagcttcctgcagcaatgcctcaggccgtgacagtt
acaccagaggaacgcgaggctatagaacgacttgaatctatggggttcgaccgggcaata
gttcttcaagtgttcttcgcctgcaacaagaatgaggagctggctgcaaactacttgttg
gaccatatacatgagtttgaagagtga

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