Salvia hispanica (chia): 125210708
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Entry
125210708 CDS
T09851
Name
(RefSeq) long chain base biosynthesis protein 2a isoform X1
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00600
Sphingolipid metabolism
shis01100
Metabolic pathways
shis04382
Cornified envelope formation
Module
shis_M00094
Ceramide biosynthesis
shis_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
125210708
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
125210708
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
shis01007
]
125210708
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
125210708
Amino acid related enzymes [BR:
shis01007
]
Aminotransferase (transaminase)
Class II
125210708
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
125210708
NCBI-ProteinID:
XP_047966241
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Position
3:25101433..25105831
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AA seq
488 aa
AA seq
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MIIPYLTALTTYFSYGLLFAFGQLRDFFRKSVDCWSASTLQGYAPICLGLEDFYIRRLYL
RIQDCFNRPISSPPDAWFDVVERVSNDNNKTLKRTAKVNRCLNLGSYNYLGFAAADEYCT
PRVIESLKKYTPSTCSTRVDGGTTKLHAELELCVANFVGKPASIVFGMGYVTNSAILPVL
IGKGGLIISDSLNHNSIVNGARGSGATVRVFQHNTPSHLENVLREQIADGQPRTHRPWKK
IIVVVEGIYSMEGELCKLPEIVSICKKYKAFVYLDEAHSIGAVGKSGRGVCELLGVDTAD
VDIMMGTFTKSFGSCGGYIAGSKELIEYLKYTCPAHLYATSISAPAAQQIISSIKVVLGE
DGSSRGAQKLARIRENSNFFRSELQKMGFEVLGDNDSPVMPIMLYNPAKIPAFSRECLKR
NVAVVTVAFPATPLLLARARICISASHSREDLLKALEVMSTVGDMVGVKYFPAEPNKQQV
EVGQVKVD
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcccctatctcaccgccttgaccacctacttcagctatggcctactcttcgcc
ttcggtcagctgcgcgattttttccgcaagtctgtcgattgctggtctgctagcacccta
cagggatatgcgcccatctgtttggggcttgaggatttctacattcgccgcctgtatttg
agaattcaggattgcttcaacagaccaatatcaagccctccggatgcttggtttgatgtg
gtggagcgtgtctccaatgataataacaaaacactaaagcgaacagcaaaggttaatagg
tgcctgaacttgggatcttataactatctaggatttgctgcagcagatgaatactgcaca
cctcgtgtaattgagtccttgaagaaatatactccaagcacctgtagtactcgggttgat
ggaggcacaacaaaattgcatgctgaactggagttgtgtgttgccaatttcgtgggaaag
ccagcttctattgtatttgggatgggttatgtaacaaattcagccattctccctgtacta
attggaaagggaggtctgatcattagtgactctctgaaccataactcaatagtcaatggt
gctcgtggatccggggctactgttcgagttttccagcataacacaccatcacatttggag
aatgttctgagggagcaaattgctgatggacagcccagaactcacaggccctggaaaaag
ataattgttgtggtggagggaatctacagtatggaaggggaactttgcaagctccctgaa
attgtttccatctgcaagaaatacaaggcatttgtttatcttgatgaggctcacagcatt
ggagctgtagggaaaagtggaagaggtgtttgtgaactcctaggagttgatactgctgat
gtggatataatgatgggaactttcactaaatcatttggatcatgtggtggttatattgca
ggatctaaggaacttattgaatacctgaaatacacatgtcctgctcacctttatgccacg
tcgatatcagcaccagctgctcagcaaattatttcttccatcaaggttgttcttggagaa
gatggttctagcagaggggcgcaaaaactagctaggattcgtgagaacagcaactttttc
aggtccgaattgcagaaaatggggtttgaggttctaggtgataatgattcccctgttatg
ccaataatgctctacaatcctgcaaaaattcctgccttttcacgagagtgcctcaaacgg
aatgttgctgtggttacggttgctttcccagccaccccgttattgttggcccgtgctcgc
atttgcatttctgcttctcattcaagagaagaccttctcaaagctttagaggttatgagc
acagtaggggatatggtgggtgttaagtactttccggcggagccgaataagcagcaagtg
gaggtagggcaggttaaggtagattga
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