Salvia hispanica (chia): 125210745
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Entry
125210745 CDS
T09851
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K12897
transformer-2 protein
Organism
shis
Salvia hispanica (chia)
Pathway
shis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
125210745
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125210745
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125210745
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
125210745
Spliceosome [BR:
shis03041
]
Common components
Common spliceosomal components
SR proteins
125210745
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
CoV_nucleocap
Motif
Other DBs
NCBI-GeneID:
125210745
NCBI-ProteinID:
XP_047966284
LinkDB
All DBs
Position
3:complement(49134458..49138409)
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AA seq
235 aa
AA seq
DB search
MTKGERTSPPESRTSPRHSSRRSRSISRSRRSRSRSRSEDALNPGNNLYVTGLSTRVTET
ELENYFKREGKVVKCHLVRDPHSKESRGFAFVTMETNKDAEHCIKNLNRSVMEGRLITVE
KNLPDIVWQQPWLKGNEGELQLLESMKVLKIKEETAGTGKDLVVTHLVGDMTEIMITGND
MGYVPPLIAGGEVMMVITIGVTDSVPSSCSVELEPAYPSSTSSQLTLKRIMNFGN
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaggggaaagaacctcaccgccagagtcgagaacctcaccgcgacactcaagt
cgcaggtcacgatctatatccaggtcccggagaagtcgttctaggagccgttctgaggat
gctcttaatcctgggaacaatctttatgtcactggtctttctacaagggttactgaaact
gaactcgaaaattatttcaaacgtgaagggaaggttgttaagtgccatttggtcagagac
cctcatagtaaggagtcccgtggttttgcatttgttactatggagaccaacaaagatgca
gagcattgtattaagaacctgaaccggtctgttatggaaggccgattaattactgttgaa
aagaatctgcctgatattgtttggcagcagccatggctaaaaggaaacgagggagaactc
caactcctggaaagtatgaaggtgttaaaaataaaagaggaaacagctggaacaggcaaa
gatctcgtagttactcacctcgtaggagacatgacagagataatgataaccgggaacgac
atggggtacgttcctccactgatagcaggaggggaggtgatgatggtcatcaccatagga
gtcacagacagcgttcctagttcctgtagtgttgagctagaacctgcatatccttcatct
acatcaagtcaactaaccttgaagaggattatgaattttgggaactaa
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