Salvia hispanica (chia): 125210821
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Entry
125210821 CDS
T09851
Name
(RefSeq) sister chromatid cohesion 1 protein 1
KO
K06670
cohesin complex subunit SCC1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shis03036
]
125210821
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
125210821
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
Motif
Other DBs
NCBI-GeneID:
125210821
NCBI-ProteinID:
XP_047966375
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Position
3:52092134..52097183
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AA seq
630 aa
AA seq
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MFYSHQLLARKAPLGQIWMAATLHAKIHRRKLDKLNIIKICEEILNPSVPMALRLSGILM
GGVVIVYERKVKLLYDDVNRLLVEINEAWKVKSAPSDPTRLPKGKAQAKFESVTLPPNRN
EDLGEADESLPHFNTETFTDFHQTSYFAMRLDSLDDSYLNQNPQGDQDQNHHQAEAAEIT
LNDNYDSYQADTTTFIHFERFDVEGDEETQLNFTPPEHVEIPNIIPSPPHQEELPKSDEV
LERHHEEQVNQQSAESMKTDLDQKRKKVVQRRARKPTGRVMDYDQTIITGHIYQNWLQNS
TDIVRERKRKRPMDALSLMKIGTVMELPSVVLVGSLFTRELGRVYYPEPLLEMWRSSIQP
PPHDSPSGGASRPQPPEPSSSSPPDRMHFPEPARDPFEDFHSGVGSPPMRISVEKQRANN
EMPPEVLIDELRNNLRNNVFGVVDTNGVSASKLNLMATPGNSSDGIRSIPSSGSGHGFFS
HNSDATSGRSSKKRPFSASKNSGNGLEPVAEDLSWEHPDPNFKLAKLSKNELTPDFELLV
ETGPTQTQKHPVINQPLDQITDSIRVHLKNHFDTPGNAKVESLDQLAFGMNRKRAACLFY
QTCVLATRDYIKVEQKMPYGDILISRGPEM
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgttttactctcatcagctcttagctcgcaaagctccactcggccagatatggatggcg
gcaacgctgcatgcaaagatccaccgccgaaagcttgacaagcttaatattatcaaaatc
tgcgaagagattttgaacccctctgttccaatggctctcagactttctgggattctcatg
ggtggagttgtaattgtttatgagagaaaagttaaactactctacgatgatgtaaaccgt
ctgctggtggaaatcaatgaagcttggaaagttaaaagtgctccatcagatccaacaaga
cttccaaagggcaaagctcaagccaaatttgaatctgttacactgccaccaaatcgtaat
gaggacctgggggaggctgacgagtcacttccacattttaatacagaaacctttacggat
tttcatcagacctcctattttgctatgagactggatagcttggatgattcctatctaaac
caaaaccctcagggtgatcaagaccagaaccaccatcaagctgaggctgctgaaattaca
ctaaatgataattatgattcgtatcaggcagacaccacaacattcatccactttgaaagg
tttgatgttgaaggggacgaggagacacaattgaacttcactccaccagaacatgtggaa
atccctaatatcataccatctccacctcatcaagaggagctccctaagtctgatgaagtc
ctggaacgacatcatgaggagcaggtcaatcagcaatcggctgaaagcatgaaaactgat
ttggatcaaaagaggaagaaagttgttcaaagaagggcaaggaagccgacaggtcgtgta
atggactatgatcaaactatcattactggtcacatatatcaaaactggcttcagaattcc
actgatattgtaagggaaaggaaaagaaagagaccaatggatgccttgtccttgatgaag
ataggcactgtcatggagttgccttctgttgtactggttgggagcttatttacacgtgaa
cttggacgagtttactatccagagcctcttttggaaatgtggagaagtagtattcaacca
cctccacacgattcaccttctggaggagcttctcgccctcagccaccagaaccgtcatca
tcatcgccaccagatagaatgcattttccagaaccagcaagagatccttttgaagacttc
cacagtggagttggctcacctccaatgaggatttccgttgagaagcaaagagcaaataat
gagatgccccctgaggtgttaatcgatgagcttaggaacaaccttaggaacaatgtattt
ggagttgtagacactaatggagtgagcgcatccaagctcaacctgatggctaccccagga
aattccagtgatggaataaggtcaatccccagttcaggatcggggcatggtttcttctca
cacaactcagacgccacatcaggaaggtcgagcaaaaaaagacccttctctgcttctaaa
aacagtggcaatggacttgaacctgtagcagaggatctttcatgggagcatcctgatccc
aactttaagttagccaaactatcaaaaaatgagttaacaccagatttcgaacttctggta
gaaactggaccaacacaaacacagaagcatcctgtcatcaatcagccactagatcagata
actgattccatccgagtgcacttgaagaatcattttgacacacccggaaacgccaaagtc
gagtctcttgaccaattagcttttgggatgaacagaaagagagcagcatgtcttttctac
cagacttgtgttcttgctacacgagactacataaaagttgagcaaaagatgccttatggt
gacatactaatttccagaggtccagagatgtga
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