Salvia hispanica (chia): 125210850
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Entry
125210850 CDS
T09851
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00040
Pentose and glucuronate interconversions
shis01100
Metabolic pathways
Module
shis_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
125210850
Enzymes [BR:
shis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
125210850
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
125210850
NCBI-ProteinID:
XP_047966411
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Position
3:complement(5608352..5610069)
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AA seq
403 aa
AA seq
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MARRSSDMMASLALGISSLIIMNAIAVAGEQRRLLGETVYDITKYGAKGDGKTDDAMSFI
QAFRAGCEGKTPAKIVVPPGKFMMGEVILRGKCKAPPPLIIDIQGTILANPDPSTYTNRM
WILLEYLENVKVGGGGTLNGQGANVWKYAGENNKMPVSFTFQSSINGDISNLKLVDAMGF
HSKLIDSSNIKVSKMSITAPEDSPNTDGIHLSNATNVEITDSVIATGDDCISIGTGSKNI
LVKNLKCGPGHGLAVGSLGKRPDELSVGNITFSSCTLTGTTNGARIKSYHKSPVLTADKI
VFEDLTMNNVKNPIIIDQHYFSKTQPEQSSVKITDVHFRRIKGTTVSEIPVLLNCSKKVP
CSNIELADIDLKPTGEAKTVSSACEAAVGIKGSGVLNPPLPKC
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggctagacgttcttctgatatgatggcctctttggccttaggcataagtagtttgatt
attatgaatgccatcgcggttgcgggtgaacaacgccggctcctgggtgagacggtgtac
gacatcaccaaatacggcgccaagggggatgggaaaacggacgacgcaatgtcatttatt
caggcatttagggcaggatgcgaaggcaagacaccggcgaagattgtggtcccaccaggg
aaattcatgatgggggaggttatcctaaggggcaagtgcaaggcgccaccgccactgata
atcgacattcaaggcaccatcttggccaatcccgacccgagcacctacaccaataggatg
tggatattgctcgagtatcttgaaaacgtcaaggtcggcggcggaggcaccctcaatggc
caaggggccaacgtatggaaatatgccggagaaaacaacaaaatgcctgtcagcttcacc
ttccaatcctcaataaatggagacattagcaacctcaaattggtggacgcaatgggcttc
catagcaagttgatcgacagctccaacatcaaggtctcaaaaatgagtatcaccgccccc
gaagacagccccaacacggacggaatccatctcagcaacgccaccaacgtcgagatcacc
gactccgtcattgcaaccggagacgactgcatctccatcggtaccggcagcaaaaacatc
ctagtcaaaaatctcaaatgcgggcctggacacggactcgcagtggggagtttggggaaa
cgccccgacgaattgagcgtcgggaacatcaccttctcgagctgcactctgacgggcaca
accaacggggccaggatcaagagctaccacaagtcgccggtgctgaccgccgacaagatc
gtcttcgaagatttgactatgaataacgtcaagaaccccatcatcatcgatcaacattac
ttctccaagactcaacccgagcaatcaagcgtaaagattaccgacgtccacttccgaaga
atcaagggcaccacggtctccgagattccggtgttgctcaactgcagcaaaaaggtgcca
tgctcaaacatcgaattggccgacatagacttgaaacccacgggggaagccaagaccgtc
tcgtctgcgtgtgaggccgccgtcggaatcaaaggttccggcgtcctcaaccctcctctt
cccaaatgctag
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