Salvia hispanica (chia): 125210989
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Entry
125210989 CDS
T09851
Name
(RefSeq) plant-specific TFIIB-related protein PTF2-like
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125210989
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
125210989
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF2-like_C_cyclin_rpt
Zn_Ribbon_TF
DUF5817
FtrD-like
Ribosomal_S27e
Motif
Other DBs
NCBI-GeneID:
125210989
NCBI-ProteinID:
XP_047966614
LinkDB
All DBs
Position
3:40574669..40576946
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AA seq
517 aa
AA seq
DB search
MESSRACKRCRKRTLVPEAETGNMECASCGTIQQFDTLQAPTGGITGTNVHLGTSGTGTV
HVYKETKIYHAQNLIDDFMYKLDFSPKKSEEVKNLIEKVTDGEYGQGDWFSVLIGACSYI
VMRMDQKMMPIVEVADTFCCDVHELGRMIGRVVEFVDLKLPEFDIVNAFERAMTSIPSFT
HVAADLVKRMRQQGVFLVQCLIKWFVTTGRRPMPVVAAVLVFVAQLNQVDSVKIEDVAME
LHVTISTCRLRYKELLERLVEVAQVLPWGKDVTVKNILRNAPSVMQYMEMKSFSRGGKQR
FICDVEEIVGDCLSKDIGYGYDTFNMEEDCSSSSKYFEPNCLPRDCPDKFQISHECLTLI
YSNYIEGISAIDVVNPRKRQKGTFDLHGYTEWWSGKSEMSKKMILKDILQKDVGLDARPP
SFNRACLARAERQEKIKAAKMRILRIMRPKSGGGNDLTVFEPEKARKKTRKRKCGVEIEW
EDLIIETLLLHSVKEEEIEKGHYNALLDLHVFAHVNE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttctcgcgcctgcaagcgctgcaggaagaggacgctagtccctgaagctgaa
acaggtaatatggaatgcgcatcgtgcggaaccatccaacaattcgatactttgcaagcg
cctactggcggcattactggcaccaacgtccacctcggaacctccggcaccggcactgtc
catgtttacaaggaaactaaaatctatcatgctcaaaacttgattgacgattttatgtac
aagttggacttttcacccaagaaatcggaagaggttaagaatttgattgagaaggtcact
gatggagaatacggccaaggggattggttttctgttctgattggggcatgttcttatatt
gtgatgagaatggatcagaagatgatgcccattgttgaagttgctgatacattttgttgc
gatgtgcatgaattagggcggatgattggccgggtggttgaatttgtcgatttgaagttg
cctgagtttgatattgtgaatgcttttgagcgagcaatgacgagcatccctagttttact
catgtggcggcggatttggttaagaggatgcggcagcaaggggtgtttttggtgcagtgt
ttgatcaagtggtttgttacgacgggaaggagaccaatgccagtggtggctgcggtcttg
gtttttgttgcacaattgaatcaagtagatagtgtgaagatcgaagatgtggcaatggag
ttgcacgtgacaataagtacctgcaggctaaggtataaggagcttctagagaggcttgtg
gaggttgcgcaggtgcttccttgggggaaggatgtgacggtgaagaatattttgaggaac
gccccatctgtgatgcaatacatggagatgaaatcgttcagtcgagggggaaaacaacgt
ttcatctgtgatgtggaagagattgtgggagactgcttgagtaaagacattggatatgga
tatgataccttcaatatggaagaagattgcagcagcagctctaaatattttgaaccgaac
tgtttgcctagagattgccctgataaatttcaaatttctcatgagtgtttgacactgatt
tattcaaattacatagaggggatttctgccattgatgtagtgaatccaaggaagaggcaa
aaaggaacgtttgatcttcacggatatacagagtggtggagtgggaaatcggagatgagc
aagaagatgattctgaaggatatattgcagaaggatgtgggattggatgctcggccgcca
tctttcaatagagcgtgcttggctagggctgagaggcaagaaaagatcaaggctgcaaag
atgcgcatattgaggattatgcgtcctaaaagtggtgggggcaatgatcttactgtattc
gagccagagaaagcgaggaaaaagacaaggaaaaggaaatgtggtgtggagattgagtgg
gaagatctcataattgaaactctgctccttcatagcgtgaaggaagaggagatagaaaaa
ggacattacaatgctctgttagacttgcacgtgtttgctcatgttaatgaatga
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