Salvia hispanica (chia): 125211245
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Entry
125211245 CDS
T09851
Name
(RefSeq) ABC transporter E family member 2-like
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
shis03009
]
125211245
Ribosome biogenesis [BR:
shis03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
125211245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
AAA_21
AAA_15
SMC_N
AAA_22
AAA_23
AAA_29
Rad17
NACHT
VapE-like_dom
RsgA_GTPase
DUF5906
AAA_5
AAA
AAA_30
AAA_16
nSTAND3
AAA_28
ORC-CDC6-like
VHL_C
TsaE
Motif
Other DBs
NCBI-GeneID:
125211245
NCBI-ProteinID:
XP_047966929
LinkDB
All DBs
Position
3:46271184..46274053
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AA seq
534 aa
AA seq
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MSDRKRPRLGFGDTVHCYGPNSFKLLCLPVPKRGQVMGLVGSNGIGKSTALQILSGLLKP
NLGRFENPPDWQEILDHFKGTKMKNYFTRIVVDNLKVITKPQCLNNLLRDYYIATVGEIL
SQADARDMKQQLAVDLGLIHIMDRKLGILSTGELQRVAIAYAAVHNADIYLFDEPSTCLD
IKQRLKAAQVIRSLVRPNNYVIVVEHDLVMLEYLSDFICCCFGKPGISGAVTLPYSFKEG
IDIFLAGFVPGKYKFRHKSLKFKVKIQRVSGEQIETGARHKYPSVTVTQGRKFKLKVMEG
EFSDSGIIVLLGENGTGKTTFLRILAGIFEPRTVECDVEIPKFNVSFKRQNVGIVSEHTV
RRFFLSNIRDSYKDPQFVRDVMKPLLYKNFIDKKLPNLCLEEFQRVSLIVCLGKPADIYL
IDEPSTYLDLEQSIIVSKIIKKFIHRVKKTALVVEHDFTMATYLADRVMVFEGNPSVDCV
ANPPQSVLTGMNRFLSHLDMITLRKDPTNFLPRIVNRFESIEDRDRESHYYMDD
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatcggaaacggccgcgacttggcttcggcgatacagtccattgctatggccct
aactcctttaaattgctatgtttacctgtacctaaacgtggccaagttatgggcctcgtg
ggaagtaatggcattgggaaatctactgcacttcaaattttgtctggcttgttgaaacct
aatttgggacgctttgaaaatcctcccgactggcaagaaattttggatcattttaaagga
actaagatgaaaaattacttcacccgtattgttgtggataatctaaaggtaatcactaag
cctcagtgcctcaacaatctccttagagattattatatagccaccgttggggaaattcta
tctcaggcagatgcgagagatatgaagcaacaacttgcggttgaccttggattgattcat
attatggaccgtaagttgggaattttatctactggagaacttcagagggttgcaatagca
tatgctgctgtacataatgcagatatctatttatttgatgagccgtcaacttgtcttgat
attaaacaaagattaaaagctgcccaagttatcagatccttggttcgaccaaataactat
gtgattgtggtagagcatgaccttgttatgcttgaatatttgtcggacttcatatgctgc
tgttttgggaaacctggtataagtggggcagttactcttccatactctttcaaagaagga
attgatattttccttgctggatttgtgcccggaaagtataagtttagacataaatctctt
aaatttaaggttaagattcaacgtgtaagtggtgagcaaattgaaacaggtgcaaggcac
aagtatccaagcgtgacggtcactcagggaagaaaattcaagctcaaggttatggagggt
gaattcagtgattcaggaattattgtgctgctcggagaaaatggaacaggaaagacaacc
ttcctacggatactggctggcatttttgagcctcgtacagtagaatgtgatgtggaaatt
cccaagttcaatgtctctttcaagcgacagaatgtcggtattgtttctgagcatactgtg
agaaggtttttcctttcaaacattcgtgactcatacaaggatcctcagtttgtacgtgat
gtgatgaagcctctgttatataaaaactttattgataaaaagcttccgaatctctgtctt
gaagaatttcagagggtttcactcattgtttgtcttggaaagccagctgatatatatttg
atagatgaaccaagcacatatctagacttggagcagagcatcattgtttcgaaaatcata
aagaaattcatacatcgagtgaagaagactgcacttgttgtggagcatgatttcaccatg
gcaacataccttgctgatagggtgatggtgtttgaggggaatccgtccgttgattgcgtt
gccaatccacctcaatcagtattgactggaatgaaccgcttcttatctcacctggatatg
atcacactcagaaaggaccccacaaattttctgcctagaatcgtcaacagatttgagtcg
atcgaggatcgggatcgggagtctcactattatatggatgactaa
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