Salvia hispanica (chia): 125211393
Help
Entry
125211393 CDS
T09851
Name
(RefSeq) putative uncharacterized protein DDB_G0282499
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125211393
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125211393
03019 Messenger RNA biogenesis [BR:
shis03019
]
125211393
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125211393
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125211393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUFIP1
Motif
Other DBs
NCBI-GeneID:
125211393
NCBI-ProteinID:
XP_047967118
LinkDB
All DBs
Position
3:34441224..34445090
Genome browser
AA seq
494 aa
AA seq
DB search
MNPHFNPHLHNPNNQIQLNGANAPAQHQVMMNQGNLGQINPQFRPGMLNNAQPPMPPFNN
PNPFFGQNQFIPFPQGAFHNLNANNLPQPFAQNAVNPAQFMPNWPMNVPNLVQNVTQLLQ
MQLMNGAPQNLGLFMNAQAAAGSNNQPVGGNSLPGMNHNNAPTKDIGAHHAQRNWDIFAP
GAANPQSDTGVVNDANDRKNNWRKPHEKNITGNHKHNESQRGFGNKQFRPRQNAQGNFNF
NNENRGKGNKNFVGKNFNSSEQTQVGKKRPLMLNYTEQEIKHWREERKKNYPSQANAEKK
LKKNPEQPEVEDEAAKIRRQQLKEILAKQAELGCEVAEIPSCYLSDPEQQADGNRQNNKP
FGKRDRFQNKFDKKGRFQNGGRFSKRQRYENGHSTDLQNQTGSTSMTNPTHKENKKEPSL
LKKLLSSEIKKDKKHLLQVFRFMVVNNFFENWPEKPLEFPKVIVKESGDESEILKLETDM
LEDGEFVAETTITS
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaatccccacttcaatcctcacctccacaaccctaacaatcaaattcagctcaatgga
gctaatgctccagctcaacatcaggttatgatgaaccaaggtaatctagggcaaattaac
cctcaatttcggccgggaatgctcaataatgctcagccgccaatgccaccgtttaataac
ccaaatccctttttcggtcaaaaccaatttatccccttcccacagggcgctttccacaac
ctaaatgcgaacaatttgcctcagccgttcgctcagaatgccgtcaaccctgctcagttc
atgcccaattggccgatgaatgtgccgaatttagtgcagaatgtcacgcagcttttgcaa
atgcaattgatgaatggtgcccctcaaaatttgggtcttttcatgaacgctcaagcggca
gcaggaagtaacaatcagcccgttggtgggaatagtttacccggtatgaaccataataat
gccccaaccaaagatatcggtgctcatcacgcacaacggaattgggatatctttgctcct
ggtgctgcaaatccgcagagtgatactggagtagttaatgatgcaaatgacagaaagaat
aactggagaaaacctcatgaaaagaacatcactgggaaccacaaacataacgaatcacaa
agaggatttggcaataagcaatttcgtcctcgccaaaatgcacaggggaacttcaacttc
aataatgaaaatcgaggaaaaggtaacaaaaattttgtagggaagaacttcaactcatct
gagcaaactcaagtgggaaaaaagaggcctctcatgttaaattatacagaacaagaaatt
aaacattggcgtgaagagcgcaagaaaaactacccatcacaagccaacgcggagaagaag
ttgaaaaagaatccagaacagcctgaggtcgaagatgaagccgcaaagataagacggcag
caactgaaggaaatattggcaaaacaagctgaattaggctgtgaagtggcagaaatacca
tcttgttacctatcagatcccgagcaacaggctgatggtaacagacaaaataataagcca
tttgggaagagagacagatttcaaaacaagtttgataagaagggaagattccagaatggt
ggccgcttctccaagagacaaagatatgaaaacggtcattccacagatttgcaaaaccaa
actgggagcacgagcatgaccaaccccacgcacaaggagaataaaaaggagccatctctg
ttgaagaaactactaagctctgagatcaagaaagataagaaacatctgctgcaggttttc
aggttcatggtggtgaataacttcttcgagaattggcccgaaaaacctctggaattcccc
aaagttattgtcaaagaatctggcgatgaaagcgagattttgaaactggagacggacatg
cttgaagatggtgaatttgtagctgaaaccaccataacaagttga
DBGET
integrated database retrieval system
