Salvia hispanica (chia): 125211626
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Entry
125211626 CDS
T09851
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125211626
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125211626
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
125211626
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
125211626
NCBI-ProteinID:
XP_047967459
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Position
3:30075993..30078799
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AA seq
200 aa
AA seq
DB search
MVTSPVVNTYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHN
HPHILLLQIGNTFCKLPGGRLKPGENEIDGLKRKLSSKLAANSPSLQPDWQVGECVAIWW
RPNFETIMYPYCPPHITKPKECKKLFLVHLSEREYFAVPKNLKLLAVPLFELYDNVQRYG
PVISTIPQQLSRFQFNMIHP
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgacttcgccggtggtaaatacgtatcctctttccagctacactttcggcaccaaa
gagcccaagatggagaaagacacctccgtcgccgatcgccttgctcgtatgaaagtcaac
tacatgaaggaaggtatgaggactagcgtcgagggtattttgttggtccaagagcataat
catccccatattcttcttttgcaaatcggaaatacattttgtaagcttccaggtggtaga
ttgaagccaggagagaatgaaattgacggtttgaagcggaagctctctagcaaacttgct
gctaattcaccttctctacagccggattggcaggttggtgagtgcgtggcgatttggtgg
agaccgaactttgaaacaatcatgtatccttactgccctccgcatataacgaagcctaag
gagtgcaagaagctcttccttgttcatttgtctgaacgagagtattttgctgtgccgaag
aatttgaaacttctggccgttccgttgtttgaactatatgacaatgttcagagatatgga
cccgttatatccaccatcccgcagcagctatcccggtttcagttcaacatgattcatccg
tag
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