Salvia hispanica (chia): 125211692
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Entry
125211692 CDS
T09851
Name
(RefSeq) prolycopene isomerase, chloroplastic
KO
K09835
prolycopene isomerase [EC:
5.2.1.13
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00906
Carotenoid biosynthesis
shis01100
Metabolic pathways
shis01110
Biosynthesis of secondary metabolites
Module
shis_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
125211692
Enzymes [BR:
shis01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.13 prolycopene isomerase
125211692
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GFIT
Motif
Pfam:
Amino_oxidase
NAD_binding_8
DAO
FAD_binding_2
GDI
HI0933_like
FAD_oxidored
Thi4
GIDA
Pyr_redox_2
FAD_binding_3
GMC_oxred_N
MA3
Motif
Other DBs
NCBI-GeneID:
125211692
NCBI-ProteinID:
XP_047967550
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Position
3:complement(27457845..27461935)
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AA seq
607 aa
AA seq
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MSILSSGVSFHRSILSKPEPLSSRNPRNQNRRILCLNHLNSLNSSSDGLEFGASRGKGEK
RSSLSRLKSAVDVGEVVETSGTSGRDSCSYDAIVIGSGIGGLVAATQLAVKGAKVLVLEK
YVIPGGSSGFYERDGFKFDVGSSVMFGFSDKGNLNLITQALAAVGARLEVIPDPTTVHFH
LPNGLSVQVHREYNKFISELISKFPHEKEGILKFYGVCWQVYNALNSLELKSLEEPIYLF
GQFFKKPVECLTLAYYLPQNAGDIARKYIKDPELLSFIDAECFIVSTVNGKRTPMINASM
VVCDRHFGGINYPVGGVGEIAKSLAKGLTKKGSEILYKANATSIIIEDGKAVGVNLSDGR
QFYAKTIISNATRWDTFGKLLKKENLPKEEKKFQEAYVKAPSFLSIHVGVKADVLPPDTD
CHHFVLEDDWKNLEIPYGSIFLSIPTVLDKSLAPEGNHILHIFTTSSVEDWEGLSRKDYE
EKKERVAGEIINRLEKKLFPGLKSSIVFKEVGTPKTHRRYLARDSGTYGPMPRNVPKGLL
GMPFNTTAIDGLYCVGDSCFPGQGVIAVAFSGVMCAHRVAADLGFEKKNPVLDTALLQLL
GWFRTLA
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcctcagttctggggtttctttccatcgctcaattttaagtaagcctgagcct
ttgagcagccgaaaccccagaaaccaaaatcgcaggattctctgtttaaaccatttgaat
tccttgaattcgagcagtgatgggttggaatttggggccagcaggggtaagggtgagaaa
aggagcagtctttctaggttgaaatcggctgttgatgttggggaagtggtagagacttct
gggacaagtgggagggatagctgctcctatgatgcaattgttataggttccgggattggg
gggctggtggcggcgacacagctggcggtgaaaggggcgaaagttttggtcttggagaag
tatgtgattcctggaggaagctctgggttttatgagagggatggctttaaattcgatgtt
ggatcatcggtcatgtttggtttcagcgataagggaaatctgaatttgatcacacaagca
ttagcagctgtgggagctaggctggaagtgatacctgatcccaccactgttcattttcat
ttacctaatggcctctctgtccaagtacatagagaatataacaagtttatttctgaactt
atcagtaaattccctcatgagaaagaagggattctcaaattctacggtgtctgctggcag
gtctataatgcactgaactcattggagttgaagtcactggaggagccaatctaccttttc
gggcaattttttaagaagcctgttgaatgcttgactctagcctactatcttccccaaaat
gctggtgacattgctcgaaagtatatcaaagatcctgagttgctgtcctttattgatgct
gagtgtttcattgtgagtacggttaatggtaagcggacacctatgatcaatgcaagcatg
gttgtatgtgatagacattttggtgggatcaactatcctgtcggaggagttggagaaatt
gcaaagtcattagcaaagggtttgactaaaaaggggagcgagatactttataaggcaaat
gctaccagcattatcatagaagacggaaaagcagtgggggtgaatctatcagatggaagg
caattttatgctaaaaccataatttcaaatgccactagatgggataccttcggcaagctc
ttgaaaaaagaaaatttacccaaggaagaaaaaaagtttcaggaggcatatgttaaagca
ccatcttttctctctattcatgtgggggttaaagctgatgttttaccaccagataccgat
tgccaccatttcgtcctagaggatgactggaaaaacttggaaatcccttatggaagtata
tttctaagcattccaactgtcctcgataaatcattggctccagaaggaaaccacattctt
cacattttcacgacttcttcggttgaggactgggagggtctgtcgcgcaaggattatgaa
gaaaagaaggaacgtgtggccggagagataattaacaggctcgagaagaaactattccct
ggactgaagtcatctatagtatttaaggaggtggggacaccaaagacacatcggcgatat
ttggcccgtgatagtggcacttatggtccaatgcctcgaaatgttccgaagggcttactg
ggcatgcccttcaacacaacggctattgatggtttgtattgtgtgggagatagttgcttt
cctgggcaaggtgtcatagctgtagctttttcgggagttatgtgtgcacatcgagtggcg
gctgatttgggattcgagaagaaaaaccctgtgcttgataccgctctccttcagctactt
ggttggttcaggactttagcatga
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