Salvia hispanica (chia): 125211747
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Entry
125211747 CDS
T09851
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125211747
Transcription machinery [BR:
shis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
125211747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
DO-GTPase2
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
125211747
NCBI-ProteinID:
XP_047967614
LinkDB
All DBs
Position
3:30346436..30349431
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AA seq
520 aa
AA seq
DB search
MFGADSFGMGFVSVSSSAARTPLEVGVKYLSRESLSRKPIVLSFQKDENKKLALITPREP
VALPLETNKGNHKRLRKGKKRPERVNVALTDQASPSTSDLYYNEAAAKLEYIFNQSPTEA
VVVDEVKDCRIKRRQSRRIRTGETVETEKKTVVRNQKKESRLTLEKRIALKTKKAGESVA
SSEKIKHRNHDEFEKTNRLVRDYSASSDLVSLDWKKMKIPPVLPSSEHAWLFKLMQPMKE
ILQVKKSAQKDLGKELTEGELANATNMSTVKMRKQLEVGRAARNKLIKHNLRLVLFVMNK
YFQDFASGPRFQDLCQAGVKGLITGIDRFEPKRKFQLSTYSLFWIRHAIIRSMTLSSFTK
VSFGLESIRADIHRTKLMLSFELQRLPTKEEIIDRVGISAERYHEVMRAAKPILSLHAKH
AVTQEELINGIKDVDGVEGDQRRQPALLRLALDDVLDSLKPKESLVIRQRYGLDGKGDRT
LGEIAGNLNISREMVRKHEVKALMKLKHPARVDYLHRYSF
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtttggagctgacagttttggcatgggatttgtgtctgtttcgagctctgctgcacga
actcccttggaagtaggcgtcaaatatttgtctcgtgaatcgttatctagaaaaccaatt
gtattatcatttcaaaaggatgaaaataagaagttagctctaattacgcctagggaacct
gttgctttgcctctggagacaaataaaggaaaccataagaggttaagaaaggggaaaaag
cggccagaacgagtaaatgtggctttaactgaccaagcatctccgagtacatcagatttg
tattacaatgaagccgctgcaaagctggagtatatatttaatcaaagccctacagaggct
gttgttgttgatgaggtgaaagattgtaggataaagagaaggcagtcacgaaggataagg
actggagaaaccgtggagacggagaaaaaaactgttgtaaggaatcaaaagaaggagagt
aggttgactcttgagaagaggattgctctcaagacgaagaaagcaggtgaatccgttgcg
tcatctgaaaaaataaaacacagaaaccatgacgaattcgagaagaccaataggcttgtt
agggactattcagcttcctcggacttggttagcttagactggaagaaaatgaagatccct
ccggttcttccttcatctgagcatgcctggctgtttaagctgatgcaacctatgaaggaa
atcctccaagtaaagaagagtgcacagaaggatttaggaaaagagttaactgaaggtgag
ttagcaaatgcaacaaatatgagtactgttaagatgaggaaacaattagaggttggtcga
gctgccagaaacaagttgatcaagcacaacctgcgacttgtcttgttcgtcatgaataag
tattttcaagacttcgctagtgggccacggttccaagacttgtgtcaagctggtgtaaag
ggtctcataacgggtattgaccgctttgagccaaaacggaagttccagctctcaacgtat
agcctcttttggattaggcatgccattattcgctccatgacgctttcaagtttcacaaag
gtgtcttttggccttgagtcgatccgagctgatattcacagaaccaagctaatgttgtcg
ttcgaacttcaaagattgccgactaaagaagaaattatagatcgagttgggatctccgct
gaaagataccatgaagtaatgagggcagcaaagcctattctttcattgcatgcaaagcat
gctgtgacccaggaagagctcatcaatggaatcaaagacgtagatggtgtcgagggagat
caaagaaggcaacctgcgcttctcaggcttgctctagacgacgtgctcgattctctgaag
ccgaaggagagcttagtgatcagacaacggtatgggcttgatggcaaaggagatagaaca
ctaggagagattgcaggaaatctcaacatttctcgggaaatggttcggaagcatgaagtg
aaggctctcatgaagctcaagcatccagctcgagtcgattaccttcatcgctacagtttc
taa
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