Salvia hispanica (chia): 125211796 Help Entry 125211796         CDS       T09851                                  Name (RefSeq) endoribonuclease Dicer homolog 1   KO K11592   endoribonuclease Dicer [EC:3.1.26.-] Organism shis  Salvia hispanica (chia) Brite KEGG Orthology (KO) [BR:shis00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03036 Chromosome and associated proteins [BR:shis03036]     125211796 Chromosome and associated proteins [BR:shis03036]  Eukaryotic type   Gene silencing    RISC (RNA-induced silencing complex)     125211796    microRNA pathway     RISC loading complex      125211796 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Ribonuclease_3 Ribonucleas_3_3 Dicer_dimer PAZ dsrm Helicase_C DND1_DSRM DEAD ResIII Dicer_PBD Cas3-like_C_2 SWI2_SNF2 SNF2-rel_dom Piwi Motif Other DBs NCBI-GeneID:  125211796 NCBI-ProteinID:  XP_047967687 LinkDB All DBs Position 3:26315744..26326481 Genome browser AA seq 1926 aa AA seqDB search MGEEAGSPANARSLVADGRPSYWLDACEDVSCDDYFVDFGPGTTNSVPGTEPHSGGCTDP GFFGGIDQILDSIKNGGTDMVNHTPANGISNGTHTSPAPQVCVQDQRSPSKNAVNNGNGQ SLVVSSNSSKNDKTNLGKRSHEVNGSEQRRDKKVRGRDPMERKIWDRAPRRKRQRGWDDM ESDGQLRDQVRRKERHGAGNWKDRDHREARGYWEREKLTNELVFRTGSWEACKNRDEKAN AQKNNKYSGCSDETKPEQPTEKPPEEQARQYQLDVLDQAKKRNTIAFLETGAGKTLIAVL LMKSISAELQKQNKKMLAVFLVPKVPLVYQQAEVIRERTGFQVGHYCGEMGQDFWDARRW LREFESKQVLVMTAQILLNILRHSIVKMEAINLLILDECHHAVKKHPYSLVMSEFYHTTQ KEKRPSVFGMTASPVNLKGVSSQVDCAVKIRNLESKLDSVVCTIKDREELAKHVPMPSEV VVEYDKAASLWSLHEQIKQMEQTVEEAARSSSRRSKWQFMGARDAGAKEELRQVYGVSER TESDGAANLIQKLRAINYALGELGQWCAYKVAQGFLTALQNDERANYQLDVKFQELYLDK VVSLLQCQLSEGAILESDTREAETNNGPADENGPEELEEGELTNNSVVSGGEHVDVIIGA AVADGKVTPKVQSLIKILLKYQHTDDFRAIIFVERVVTALVLPKVFAELPSLSFVKSASL IGHNNSQEMRTSQMQDTIARFRDGRVTVLVATSVAEEGLDIRQCNVVIRFDLAKTVLAYI QSRGRARKPGSDYILMVERGNLSHMAFLKNARNSEETLRREAIERTDISHLKDNGSINSA EDIAGAVYQVESTGAVVSLNSAVGLIHFYCSQLPSDRYSILHPEFIMERHEKPGSPTEYS CKLQLPCNAPFEKLEGPPCKSMRLAQQAVCLAACKKLHEMGAFTDMLLPDKGMKGEADKV EQNDDGDPLPGTARHREFYPEGVADILRGEWVLSGRSCDDSKLFHLYMYSVKCENIGFSK DPLLTLVSDFAILFGNELDSEVLSMSMDLFIARSLVTKASLDYKGLIDIRETQLESLKSF HVRLMSIVLDVDVDPSNTPWDTAKAYLFVPLTGSRSEDAVNEIDWDLIQTVTKTEAWNNP LQRARPDVYLGTNERTLGGDRREYGFGKLRNSMAFEQKCHPTYGIRGAVAQFDVVKASGL APKRNDTDLLHQVDLGEGKLMMADSYIKAEDLVGKIVTAAHSGKRFYVDSVRYDMTAENS FPRKEGYLGPLEYSSYADYYKQKYGVDLTYKQQPLVRARGVSYCKNLLSPRFEHSEGPEG QSEDIHEKIYYVFLPPELCFVHPLPGSLVRGAQRLPSIMRRIESMLLAVQLKDIINYPVP AIKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSN IVLYQYALVKGLQSYIQADRFAPSRWAAPGVLPVFDEDTKEDSSSFFYEEVNSDGSFRRK HDDEYEDEMEDGELESDSSSYRVLSGKTLADVVEALIGVYYVEGGKHAANHLMRWTGIDI DFDLKEINYSVMPSSVPENILRTVDFDALGKALSMQFSDKGLLVEAITHASRPSSGVSCY QRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHNLHLHLRHG SSALEKQIRDFVKEVQVELSKPGFNSFGLGDCKAPKVLGDIVESIAGAIFLDAGCNTALV WKVFQPLLDPMVTPETLPMHPVRELQERCQQQAEGLEYKATRSGNLATVEVFVDGVQVGV AHNPQKKMAQKLAARNALEALKEKEMADAIKSAEDDDCKEKKNGNQTFTRQTLNDICLRR NWPMPLYKCINEGGPAHAKRFTFSVRVNTSDKGWTDECIGDPMPSVKKAKDSAAVLLLEL LNKWYA NT seq 5781 nt NT seq  +upstreamnt  +downstreamnt atgggagaggaggctgggagtccggctaatgctcgtagtctcgttgccgatggccgacct tcgtactggttagatgcctgcgaggatgtgtcgtgtgacgattactttgttgattttgga cctggtacaaccaattcagttcctggcactgaaccacactccggaggctgcacggatcct ggtttttttgggggaattgatcagattcttgacagcataaagaatggtggcacggacatg gttaatcatactcccgcgaatggtatcagcaatggaactcatacttctcctgccccgcaa gtgtgtgtgcaggatcaacgatcaccgtctaagaatgctgttaataatggcaatggacaa agtctggtggttagtagcaacagctcaaagaatgacaaaactaaccttggtaaaaggtct catgaagttaatggttctgagcaaaggcgtgacaaaaaggttcgtggaagagatccaatg gagaggaaaatttgggatagggctcccagaaggaagagacaacgtggttgggatgatatg gagagtgatgggcagctgagagaccaagtcaggaggaaagaacgccatggtgcaggtaac tggaaggacagagaccacagggaagcaaggggttactgggagagggaaaaattaactaat gaattggtttttcgaactggttcttgggaagcatgtaaaaatagagatgagaaagcaaat gctcagaaaaacaacaaatattcggggtgttcagatgagacgaaaccagagcagccgacc gagaaacctcctgaggagcaagctcgccaataccagttggatgtcctagaccaggcaaag aagagaaatacaattgccttccttgaaacaggtgcaggaaaaacactgattgctgttctc cttatgaaaagcatcagtgctgaattgcaaaaacaaaataagaaaatgctagctgttttt ttggtgcctaaagtacctcttgtttatcagcaagctgaggtaatccgtgagcgtacaggt tttcaagtcggccattactgtggtgaaatgggtcaagatttctgggatgcaagaagatgg ctgcgtgaatttgaaagcaaacaggtcttagtgatgacggctcaaattcttctgaacatt ctaaggcatagtatagtgaaaatggaagccatcaatctccttattttggacgagtgtcat catgctgtgaagaaacatccttactctttggtgatgtcagagttctatcatacaacacaa aaggagaagaggccatcagtttttgggatgactgcatctcctgtaaacttgaagggtgtt tctagtcaagttgattgtgcagtaaagattcggaatctagaaagtaagctagattctgtg gtttgtacaattaaggaccgtgaggagttggcaaaacatgtgccaatgccttcagaagtg gtagtggagtatgataaggctgccagtttgtggtcactccatgagcaaataaaacaaatg gaacagactgtcgaagaagctgctcgttcaagctccagaagaagtaaatggcagtttatg ggagccagggatgctggagctaaggaagagctgcgccaagtttatggtgtctctgaaagg actgaaagtgatggtgctgctaatttaatacagaagttgagggccatcaactatgcactt ggtgaacttggacagtggtgtgcttataaggttgcacaaggatttttaactgctttgcag aatgatgagagggcaaattatcagcttgacgtcaagttccaggaattgtatctagacaaa gttgtttctcttctacaatgtcagttgtctgaaggagctattttggagagtgatactaga gaggctgaaacaaataatggccctgcagatgagaatggacctgaagaactagaggaagga gaacttaccaacaatagtgttgtatctggcggagagcatgttgatgtgattattggagct gctgttgctgatggaaaagtgactccaaaagtgcagtcattgatcaaaatacttctcaag tatcagcatacagatgattttcgtgctataatctttgttgaacgtgttgtgactgccttg gttcttcctaaggtttttgcagagctcccatcattgagttttgtcaaatctgcaagtttg attgggcacaacaacagtcaagaaatgcgaaccagccagatgcaagatactattgcccga ttcagagatggacgggtaactgttttagttgccactagtgttgctgaggagggacttgat attcggcagtgcaatgttgtcattcgctttgatcttgccaaaactgtattggcatatatt caatctagaggccgtgccagaaaacctggttctgactacatcttgatggttgagagggga aatctgtcccatatggccttcctaaagaatgctaggaatagtgaggagactttgcgcaga gaagccattgagaggactgatatcagtcatctcaaggataatggcagcataaattctgct gaggatatagctggtgcagtgtaccaagtagagtccactggtgctgttgttagtttaaat tctgcagtagggctgatccatttctactgctctcagctgcccagtgacagatattcgatt ctccatccagagtttataatggagcgccatgaaaaacctggaagccctactgagtactct tgcaagctccagcttccctgtaatgcaccatttgagaaactggagggacctccatgcaaa tcaatgcgtcttgcacaacaggctgtttgtttggctgcttgcaagaaactccatgagatg ggagcattcactgatatgctattgccagacaagggaatgaagggagaagctgataaagtt gaacaaaatgatgacggggatcctcttcctggaactgctaggcatagagaattttaccct gaaggagtagctgacattctcaggggagaatgggtattgtcagggaggagctgtgatgac tcaaagttgtttcatctttacatgtattctgtcaaatgtgaaaacattggcttctccaaa gatccactcttaactctggtttccgactttgcaatattgtttggcaatgaattggattca gaggtactatcaatgtcaatggatttatttatagctcggtctttagtaacaaaggcatct cttgattataaagggcttatagatatcagagaaactcagctggaatcgctcaagagcttt catgtaagattgatgagcattgtattggatgtggatgttgatccctcaaataccccgtgg gacacagcaaaggcatatttatttgttcccttgactggaagtagatctgaagatgcagtg aatgagattgactgggatctaattcagactgttacaaagactgaagcctggaacaatccc cttcagagagctaggccagatgtttacctaggcaccaatgaacgaactctaggtggggat aggagggaatatggatttggaaaattaagaaacagcatggcctttgagcagaaatgccac cctacttatggtattagaggagctgttgcccagtttgacgttgtaaaagcatctgggtta gcacctaaaagaaatgatactgatttgctacaccaagttgatttaggagaaggcaagttg atgatggcagattcctatataaaagcagaagatctggttggaaaaattgtgactgctgct cactctggaaagaggttctatgttgattctgtacgctatgatatgactgcagagaactca tttccaaggaaagaaggctaccttggtcctctggagtacagttcttatgctgattattat aagcaaaagtacggagtagatttaacatataagcagcaacctctagtaagagcccgtggt gtttcctattgcaagaatcttttatctccacgatttgaacactcagagggtcctgagggt caatctgaagatatccatgagaagatatattatgtttttctccctcccgagctttgtttt gtgcatccacttcctggatcgctagttaggggtgctcaaagattgccatcaattatgaga aggattgaaagcatgctgcttgcagtacagcttaaggatattattaattatcctgttccc gcgataaagatcctggaggctttgaccgcagcatcatgtcaagagactttctgctatgaa cgagcagagctattgggagatgcttatttaaaatgggtagttagtagatttcttttttta aaatatcctcagaaacacgaaggtcagcttactagaatgaggcaacaaatggtaagcaac attgtactttatcagtatgcactggtgaaagggcttcagtcgtacattcaggcagatcgc tttgctccatctagatgggctgcgcctggagtgctccctgtttttgatgaagacaccaag gaagactcatcgtcatttttttatgaagaagttaattctgatggtagtttcaggagaaag cacgatgatgaatatgaagatgaaatggaagatggggaacttgagagtgactctagctca tatcgtgtgctgtctggaaaaacactggcagatgttgtggaagcgcttattggtgtatat tacgtagaaggtggaaagcatgccgccaaccaccttatgagatggacgggaattgatata gattttgatttgaaagagataaattactcagttatgccgagttccgttcccgaaaatata ctgagaactgttgattttgatgcacttggaaaggccttgagtatgcaattcagtgataag ggcttgttggtagaagctataacccatgcatcgcgtccatcttcaggagtatcttgttat caacgattagaatttgttggtgatgcagtgctggatcaccttatcacaaggcatctattc ttcacatacacagatttacctcctggacgcctcacagatttgcgagctgctgctgtgaat aatgagaatttcgctcgtgtggctgttaaacataaccttcacttacatcttcgtcatgga tcaagtgcacttgaaaaacagattcgagattttgtgaaagaggtccaggttgaactttca aaacccgggtttaactcttttggcttaggggactgtaaagctcctaaagttctcggtgac attgtagaatcaattgctggggctatctttcttgacgctggatgtaacactgcactcgtc tggaaggtttttcaacccttgttggacccaatggttaccccagaaacgctccccatgcac cctgtcagagaattacaagaaagatgccaacaacaagctgagggtctggaatataaagcc acccgaagtgggaacctggctactgtggaagtattcgttgatggtgttcaggtcggggtt gctcacaacccccaaaagaaaatggcacaaaaattagctgctcgaaatgctctcgaggca ctgaaggagaaggagatggccgatgccataaagagcgcagaggatgacgactgtaaagag aagaaaaatgggaaccagacttttacaagacagaccctgaacgatatatgtctacgcaga aattggccgatgcccctatacaagtgtataaatgagggtggtccggcacatgcgaaaaga tttacattttctgtacgcgttaatacgtctgataaaggatggactgatgaatgcattggt gatccgatgccgagtgtgaagaaggcgaaggactcagctgcagttcttcttttggaactt ctgaacaaatggtacgcataa

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