Salvia hispanica (chia): 125211815
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Entry
125211815 CDS
T09851
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
shis01002
]
125211815
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125211815
04121 Ubiquitin system [BR:
shis04121
]
125211815
Enzymes [BR:
shis01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125211815
Peptidases and inhibitors [BR:
shis01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125211815
Membrane trafficking [BR:
shis04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
125211815
Ubiquitin system [BR:
shis04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125211815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Zn_ribbon_16
Ribosomal_S27
Motif
Other DBs
NCBI-GeneID:
125211815
NCBI-ProteinID:
XP_047967709
LinkDB
All DBs
Position
3:52173221..52176556
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AA seq
538 aa
AA seq
DB search
METKKLRSLICNGPRTSCVSNSGWKISIGVLCAVGTVLAARFSRYFDFRISYEDADSTGV
WAVPGLQNLGNNCFLNVVLQALSSCVSFQKYLWEMMEEYGSLSVEEVDDNCGSENLPLFS
SLASLLEELCCVRHQKTVLNPRKLMAEMDHYIPKFNLSRQQDAEEAFSHLLSSLREEIYE
HFIPTTCSLADLPSLPNGRILTIKTSKDEIELQRWSRSFLKPFDGILGSILVCQSCSFQI
SLDFQHFHSLHLSPPVSSDGTIMAGCTLEDCLKRYFVAEHIENYYCSNCWHKAAIEYVSI
FKDKADIEKLGSCNRGESCQCRTLSSLESLPWSNRFSRTLKQLSIAWSPKILCIHFQRAS
YNVLGQSTKLRGHVSFPSVLDLSSFTNTGVGIKAMEASSSFRPSSQRVMAFPRFMYQTTA
LDPGTSIAVENDPHLEDLGTSSPDSRNRADGNVEAAAPPTRPARSPVYRLVSVVEHFGSS
GGGHYTVYRKVRGKIGDDGDDEIQQWFCISDSQVDTVLEREVMDANASMLFYEKFENF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaagaagctgcgttctttgatttgcaatggtcctagaactagttgtgtctca
aattctggctggaaaatatcaattggtgtattgtgcgctgttggaacagtcttggcagca
agatttagtagatatttcgatttcagaatctcgtatgaagatgcagattctactggtgtt
tgggctgttcccggattgcaaaatctcggcaacaattgtttcttgaatgttgttttgcag
gcattgtcgagctgcgttagcttccagaaatatctgtgggagatgatggaagaatacggc
tcgttatcagttgaagaagtagatgataattgtggtagtgaaaatcttccactttttagt
tcgttagcttcactactggaagagttatgttgtgttaggcaccaaaaaactgtactcaac
cctcggaaattgatggctgagatggatcattatattccgaagttcaatctatccaggcag
caggatgccgaggaagcattttcccatctcttgtcttcgctgagagaagaaatatacgag
cattttatccccacaacatgttccttagccgatttgccctcacttcctaatggtaggatt
cttaccataaagaccagcaaagatgagattgagttgcaaagatggagccgtagttttctc
aagccctttgatggaatcctcggcagcatcttagtttgccagagttgttcgtttcagatc
tctctcgattttcagcattttcatagtttgcacctttcgcctccagtgagcagtgatggt
acaattatggctggatgcacattggaggactgcctaaagcgatactttgtagccgaacat
attgagaattattactgcagcaactgttggcataaggctgcaatcgaatacgtgtctatt
ttcaaagataaggcggatattgaaaaactaggaagctgtaatcgaggcgaatcttgtcaa
tgccggacactatcttctctcgaatcacttccttggtcaaataggttctctcgtacgctc
aagcaactgagtattgcatggagccctaagattttgtgcattcatttccaacgagcttca
tataatgttcttggacaatcgacgaaacttagaggacatgtctcgttcccgtcggtcctc
gatctatcttcgttcaccaacactggagtcgggatcaaagccatggaagcaagttcgtca
ttcaggccgtcgagccagcgagtaatggccttccctcgtttcatgtaccaaacaacggca
cttgatccgggaacaagcattgcagtcgaaaacgaccctcatttagaagatctgggcacc
agctcccccgattctaggaatcgagctgatggcaacgtggaagctgcggccccaccaacg
aggccggcacgaagcccagtttaccgcctcgtctccgttgtggagcactttggaagcagt
ggcggtgggcactacacagtttacaggaaagtgagaggcaagataggtgatgatggagat
gatgaaattcagcaatggttttgtatctcagattctcaggtggatactgttttagagaga
gaagtgatggatgcaaatgctagcatgcttttttatgagaaatttgagaatttttga
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