Salvia hispanica (chia): 125211855
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Entry
125211855 CDS
T09851
Name
(RefSeq) crossover junction endonuclease EME1B isoform X1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03440
Homologous recombination
shis03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
125211855
03460 Fanconi anemia pathway
125211855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
shis03400
]
125211855
DNA repair and recombination proteins [BR:
shis03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
125211855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
Motif
Other DBs
NCBI-GeneID:
125211855
NCBI-ProteinID:
XP_047967752
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All DBs
Position
3:complement(14230054..14236751)
Genome browser
AA seq
666 aa
AA seq
DB search
MQRPIPVDILSDSDSDSEPGRNRRSLRDEAIDLTTPPPFPQSKKKQKTDTFSNPSNSTVF
IIDDDPTPIKSNTHSFVADTPFSDASFVKCSRGISSFSGLAPEELVVAETPISELPKPKV
AISTRISIAEDACPFVTNHNSGGLAPEELVVAETPISELPKPKVAISTRISTVEDAHPFV
TNHNSGEIKGWICVDSDDESEDIGRIGAMDDNASTFAARLEDETGVPSRWGESSSFSCGT
SFQHQKKDTQNSARMHILEDCSIPGTSDDGISEAHVSRDDKASKLDDTDQILNQRDNNTC
FLKEKKKRNDTVNKKGTAKEERLRLMEEKKRLKEQEKLLKAASKAEAAELKKREKEMQKW
EKGKYALKSIVAEIDTKVIELGAIGGHLLTRFAEKGLSYRITSNPVERTIIWNMAVPEEV
SLIAPERITVSYILVVYEAEEFCNLVVNKRLMDHVKSVQRCYPHHTVCYVTNKLMAYINK
REQAHYKNPANNPGWKRPAVEEAFAKLTTHFSKVHSRQCVDEAELAEHVVGLTCSLANCQ
FRKRLTRFSVNANGSAIPKDCVDRNLIKKNLWLKVLVAIPKVQPRFAIAIWKKYPTMKSL
LRVYMDPKKSVHEKEFLLKDLTTEGLLGDDRRLGEVCSKRMYRILMAQSGHIKTDDVEDG
ADFFNL
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcccaattcccgtcgacattctctccgactccgattccgattccgaacccggc
cgaaatcgccggagtctccgagacgaagcgattgacctcactacgccgccgccattccct
caatccaagaagaaacaaaaaaccgacaccttttcaaaccctagtaactccaccgtcttc
atcattgacgatgaccccacgccaatcaagtcaaatactcattccttcgtcgccgatacg
ccattctccgatgcgtccttcgtcaaatgctctcgaggaatatcctccttttcaggttta
gctcctgaggaacttgtagttgccgaaactccaatttctgaactcccgaaacctaaggtt
gcgatcagcacaagaatctccattgccgaagatgcttgtccgtttgttacaaaccacaac
tctggtggtttagctcctgaggaacttgtagttgccgaaactccaatttctgaactccca
aaacctaaggttgcgatcagcacaagaatctccactgttgaagatgctcatccgtttgtt
acaaaccacaactctggcgaaatcaagggatggatatgtgtggattcagatgatgaatct
gaagatattggtcgaattggagctatggatgataatgcaagtacttttgctgctagattg
gaagatgagacaggagttccatcgagatggggtgaatcctcgtcattttcttgtgggact
tcctttcaacatcaaaagaaagacacacagaactcagctagaatgcatatcttagaagac
tgttcaattcctggaacatcagacgatggcatatctgaggcacatgtcagtcgtgatgac
aaagctagtaaactagacgatacagatcagattttgaatcaacgggataacaatacatgc
ttcttgaaagagaaaaagaaaagaaatgacacagtgaataaaaagggaacagccaaggag
gaaagacttcgtctgatggaagaaaagaaaaggctcaaagaacaagagaagttgcttaaa
gctgcttcaaaggctgaggctgctgagttgaagaaacgggagaaggaaatgcagaaatgg
gaaaagggtaaatatgctctcaaatccattgttgctgagattgatacaaaagtgattgaa
ctgggagcaattggaggacatcttctcactagatttgctgaaaaggggctctcatatcga
ataacatcaaatccagtggaaagaactattatatggaatatggctgttcctgaagaagtt
tctctgattgctcctgaaagaattacagtctcttatattctagttgtatatgaagctgaa
gagttctgtaaccttgtcgtgaataagcgcctgatggatcatgttaagagtgttcaacgt
tgttatcctcatcacactgtatgttacgtcacaaataagcttatggcctacatcaacaaa
agggaacaagcacattacaagaaccctgctaacaaccctggttggaagcgacctgctgta
gaggaggcctttgcgaaattgaccacccatttttctaaagtacattcaaggcagtgtgtt
gatgaagctgaattagctgaacatgtggtcggtttaacttgcagcctcgcaaattgccaa
tttaggaaaagactgacgcggttttcagttaacgcaaatggatctgctatccctaaagac
tgtgttgataggaatttaattaagaaaaatttgtggctaaaggtattggtggctatccct
aaggtgcagccacggttcgctatagccatatggaagaaatatcctacaatgaagtctctt
ttaagagtgtacatggatccaaaaaaatctgttcacgagaaggaatttctgctcaaggac
ttaaccacagaaggcttactcggtgatgatagacgactcggtgaggtttgttctaagcga
atgtacagaatccttatggctcaatccggacacatcaagacagatgatgttgaggatggg
gccgatttctttaatctctag
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