Salvia hispanica (chia): 125211876
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Entry
125211876 CDS
T09851
Name
(RefSeq) ABC transporter G family member 39-like
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
shis
Salvia hispanica (chia)
Pathway
shis02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
125211876
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
shis02000
]
125211876
Transporters [BR:
shis02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
125211876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
SMC_N
AAA_29
AAA_22
AAA
AAA_25
AAA_30
AAA_33
Rad17
AAA_18
cobW
AAA_16
nSTAND3
AAA_23
RsgA_GTPase
DO-GTPase2
AAA_11
NACHT
DO-GTPase1
RuvB_N
AAA_24
Mmc1_C
AAA_5
AAA_19
Motif
Other DBs
NCBI-GeneID:
125211876
NCBI-ProteinID:
XP_047967784
LinkDB
All DBs
Position
3:27579441..27585026
Genome browser
AA seq
1356 aa
AA seq
DB search
MAAGKETIDELRHALLHAIDNEHKHEQLLRCQRSRLDRVGIEMPKIEIRFEHLAVEGDVH
VGSRALPTLINSTINFIESVLGLMKFASSKMRKMPILKDANGIIRPSRMTLLLGPPGAGK
TTFLLSLAGKLDHNLRKSGKITYCGHELSEFVPQKTCAYISQHDLHHGEMTVRETLDFSA
CCLGAGSRHDMLAELSRREKEAGIEPDLELDAIMKATSIPGKKASLITDYALKILGLDIC
SDTLVGDDMRRGISGGQKKRLTTGEMLVGPTKAFLMDEISTGLDSSTTFQIVNYMRQIVH
IMDVTMVISLLQPAPETYNLFDDVILLSEGHLVYQGPREAVLDFFHHMGFKCPERKGEAD
FLQEVTSKKDQEQYWYMTNQPYKYISPSDFAEAFSSFHVGQRLTEELSVPYNKSRAHPAA
LVKEKYGLPPWELFCACFSREWLLMKRNSFIYIFKTAQITVMSLIALSVFFRTEMPYGRL
TDGGKYFGALFFSLLNLMFNGVAELALTVIRLPVFFKQRDFYLYPAWAFCLPIWILRIPL
SVMESTIWIVLTYYTIGFAPPAGRFFGQFLTFFSINQMALGLFRFIAALGRTQVVAHTLG
TFSLFVIFILGGFIVSKNDLEPWLKWTYYISPLSYGQNAIVMNEFLDKRWSNPNTDPRFN
ESTVGEVLLHSRGFFTEERWFWICCFALLAFSVLFNILFIVALTFLKPLGDSSALTQNDD
DDDEDDRKTKENSSSYGISSTHEKGLILPFKPLSLVFDHVYYYVDVPAEMKAQGVGGDRL
QLLRDVSGAFRPGVLTAIVGFSGAGKTTLMDVLAGRKTSGYIEGSITISGFQKNQETFAR
ISGYCEQNDIHSPHVTVYESVLYSAWLRLPAQVKKDTREMFVEEVMKLVELNPIRNSIVG
LPAVYGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV
CTIHQPSIDIFEAFDELLLMAQGGRIVYGGELGSRSNKMIQYFENIRGVPKIEDGCNPAT
WMLDISTPAAEQQIGVDFAEIYSKSSLYQSNQELIQELSSPPPGSKDLYFPTKYSLSFLD
QCKACFWKHYLSYWRNPEYNAIRFLMTLLIGLVFGLIFWNKGQKIKKQQDLQNLLGAIYA
AVLFLGSTNGISVLDVVCIERTVLYREMAAGMHSAFPYAFAQVAIETVYVAIQTIAYTLL
IYSMIGFQWTIAKFLLFYYFIFTSFLYFTLFGMMFIALTPGLQVGAIVSSFFHSLWNLFS
GFLLARTQIPMWWRWYYWGSPVAWTIYGIVASQFGDLDCEIEVPGVSYVTVKTFIKQNLG
FDHDFLPIVVFMHLVFILLFVLIFGFGIKCLNYQKR
NT seq
4071 nt
NT seq
+upstream
nt +downstream
nt
atggctgccgggaaagaaaccatcgacgagctccggcatgcccttctccacgccatcgac
aatgagcacaagcacgagcagctcctacgctgccagaggagccgcttagacagagtgggg
attgaaatgccgaagatagagataaggttcgagcatttagcagtggagggagatgttcat
gttggaagcagagctcttcccactttgatcaactctacaatcaatttcattgagagtgtt
cttggactaatgaagtttgcttcttcgaagatgagaaagatgccgatactcaaagatgcc
aatggaatcattagaccatcaaggatgactctgcttttggggcctcccggtgccggaaaa
actactttcctgctttcacttgctgggaagcttgatcacaatttgaggaaatcagggaag
atcacgtattgtgggcacgagttgagtgaattcgtacctcagaagacatgtgcttatatc
agccagcatgatcttcatcatggggagatgactgtgagggagactcttgacttctccgct
tgttgcttgggcgctggctcgcggcatgacatgctggcagagctctcgaggcgtgagaag
gaggccggaatcgaacctgatcttgaacttgatgcaatcatgaaggccacatccatccct
ggcaagaaagccagtttgatcacagattatgcactcaagatacttggcttggatatatgc
tcggatactctggttggcgatgacatgaggagaggcatctcgggagggcaaaagaaacgc
ttaacgactggggaaatgctcgttggtccgacaaaagcctttctcatggatgaaatatcg
accggtttggacagctccaccacttttcagatcgtgaactacatgaggcagattgtgcat
ataatggatgtaaccatggtcatctctctgctgcagccagccccggagacctacaatctg
ttcgatgacgttatcttattatcagaaggccatcttgtctaccaaggtccacgggaggct
gtcctcgacttctttcaccacatggggtttaaatgcccggaacgaaaaggagaagctgat
tttcttcaagaagtgacatcaaagaaggatcaagagcaatactggtacatgacaaaccaa
ccctataaatacatctcaccttcggatttcgcagaggctttcagctccttccacgtaggc
caacgtctcactgaagagctcagcgttccgtacaataaatccagagctcaccctgcagct
ttagttaaggagaagtacggtttacccccttgggagcttttctgcgcttgcttttcaagg
gaatggctgctgatgaaacgtaactcgttcatttacatattcaagaccgcgcagatcaca
gtcatgtcgttgatagcactgtcggttttcttcagaacagagatgccgtatgggaggttg
acggatggagggaaatattttggtgcattgtttttcagccttctgaatctgatgttcaat
ggtgtggctgagcttgcactgacggttattaggctgccggtgttttttaagcagagagat
ttctacttatatccggcttgggcgttttgtctcccaatttggatactgagaatccccctt
tctgtcatggaatcgacgatatggatcgtccttacatactacaccataggatttgctcct
cctgctggaaggtttttcgggcaatttttgacattcttcagcataaaccagatggctctt
ggtctgttccggttcattgctgcactaggaagaactcaggtcgttgcacacacgttagga
acgtttagtttgtttgtgatcttcatccttgggggttttatcgtgtccaaaaatgacctc
gagccttggctgaaatggacgtattacatttctccgttgagctatggacagaatgccatt
gtcatgaatgagtttcttgacaagagatggagcaatcctaatacagaccctcggttcaat
gaatctacggttggagaagtcctccttcactcgaggggcttcttcacagaggagcgttgg
ttttggatttgctgttttgcacttctagcattttcggttctgtttaacatcttgtttatc
gtggcactgactttcttgaaacctctaggagattccagcgctttaacacagaatgatgat
gatgacgacgaagatgacagaaaaacgaaggaaaattcatcctcatatggaatttctagt
acacatgaaaagggattgattctgcctttcaagccgctatcactcgtgtttgatcatgtc
tattactatgtagacgtgccggctgaaatgaaagctcaaggcgttggaggtgatcgtctc
caactgctacgagacgtgagtggagcattcaggccgggagtgctaacagcaatcgttggc
ttcagtggcgctggaaagacgaccttaatggacgtcttagcaggaagaaagaccagtgga
tacattgagggaagcatcaccatttccggcttccaaaaaaaccaagaaacattcgcgcgg
atcagtggctactgtgagcagaacgacatccattcgcctcatgtcacagtctacgaatct
gttctatactctgcctggctgcgcctccctgcacaagtcaagaaagacactcgagagatg
tttgttgaagaagtgatgaagttggttgagcttaaccccataagaaactccatagtgggg
cttcccgcggtttatggcctttcgactgagcaaaggaagaggctgacaatcgctgtggag
ctcgttgccaacccttccatcatcttcatggatgaaccaacttctggccttgacgcgagg
gctgctgccattgttatgcgcactgtcaggaacactgtcgacacaggaagaaccgtcgtc
tgcacaatccaccagccaagcatagatatatttgaagcctttgatgaattactcttgatg
gctcaaggagggagaatcgtttacggaggcgaacttggtagccgatctaacaagatgata
caatactttgaaaatattcgcggggttcctaaaatcgaagacggatgcaatccagcaaca
tggatgttggatatcagcactccagcagcagagcagcaaattggagttgattttgcagaa
atttactcaaaatcctccctttatcagagtaatcaagaactcatacaagagctcagtagc
cccccaccaggctccaaagacctctactttcctacaaagtactctctctcatttcttgat
caatgcaaagcttgtttctggaagcactacttgtcgtattggaggaatcccgagtacaac
gccatccggttcctcatgaccctcttgattggcctcgtattcggcctaatcttctggaac
aaggggcaaaagataaagaaacagcaggatcttcagaatctcctcggagcaatctacgct
gctgtgctattcctaggcagcaccaatgggatcagtgtgcttgatgttgtctgcatcgag
aggactgttctgtatcgcgaaatggcagctgggatgcactcggctttcccttatgcgttc
gcgcaggtggcaatcgagacagtgtatgttgcaatacagacaatagcatacactcttctc
atctactcaatgattggattccaatggactattgccaaattcctcctcttctactacttc
atcttcacatccttcctctacttcactctgttcgggatgatgttcatcgccctcacccca
ggccttcaagtgggcgccatcgtttcatcgttcttccacagcctgtggaacttgttctcc
ggcttcctcctcgcccggacgcaaattcctatgtggtggaggtggtattactggggttca
ccagtggcttggacaatttatgggattgtggcttcacaatttggtgatttggattgtgag
attgaggtgcctggagttagttatgtgacagttaagacattcatcaaacaaaacttaggt
tttgatcatgattttctgcctattgttgtttttatgcacttggtttttatcttgctcttt
gtgcttatctttggatttggcatcaagtgtttgaactaccaaaagagatga
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