Salvia hispanica (chia): 125211945
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Entry
125211945 CDS
T09851
Name
(RefSeq) chromatin-remodeling ATPase INO80-like
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
125211945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
shis03036
]
125211945
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
125211945
INO80 complex (yeast)
125211945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
125211945
NCBI-ProteinID:
XP_047967875
LinkDB
All DBs
Position
3:complement(50897005..50907434)
Genome browser
AA seq
1506 aa
AA seq
DB search
MDSNRKYNYGNLFNLEPLMNFQLPKQDEDFDYYGNSSQDESRGAQGGALGDMNGTISERG
SKKKRRSAYSSDEEETGCHSSYISEERYRAMLGDHIQKYKRRLNCAPQNPASTRTGTMAI
KSNVALKDQKSMNDNRGGFPKFESTSDFLNSSSSQKLGNYHESDFGRQYGASRPNLEPPF
LDIGDGITYRIPLPYEKLSSSLGLPSMSDIQVEEFYLKGTLDLGSLAAMMASINKFQRRS
RAGMGDQRPQYESLQARLRAQQTNYTAENFSLSISEIDMGTNGIPEGAAGRIRRSILSES
GILQVYYVKVLEKGDTYEIIERGLPKKQKVKKDPSVIEREAMENFSKYWVNIARKEIPKH
HRIFTNFYRKQITDAKRVSETCQREVKMKVSRSLKLMKGAGIRTRKLARDMQVFWKRVDK
EMAEVRKREEKEAAEALKREQELREAKRQQQRLNFLLSQTELYSHFMQNKTSEPSGALAV
GDDKSNDQEILSEDQHQEEDDPEAAELRREALRAAHDAVSKQKKMTSAFDNECLKLRLAG
EAEAPLQDGVVTESSNIDLLHPSTMPLASTVQTPEMFKGSLKEYQLKGLQWLVNCYEQGL
NGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWADEISRFCPDLKTLP
YWGGLQERTVLRKNINPKRLYRREAGFHILITSYQLLVSDEKYFRRVKWQYMVLDEAQAI
KSSNSIRWKTLLSFNCRNRLLLTGTPVQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGI
ESHAEHGGTLNEHQLNRLHAILKPFMLRRVKKDVVSELTGKTEVTVHCKLSSRQQAFYQA
IKNKISLAELFDGNRGHLSEKKILNLMNIVIQLRKVCNHPELFERNEGSTYFHFGDVPNS
LLPPPFGELEDVFYSGGKSPIAYEIPKLVYQETAGGSNAHNSEAGQSLSRESIQKLFNIF
SPDNISSSSLQKDSGRSGTFEFSRFIDLSPSELSFLATGSFMERLLFSIMRSDRQHLDEI
LDLLMESDDGDIQYTNIGKQKVRAVTRMLLLSSRSEKNFLRRKLATGPSDSPFEALIMPY
QDRLLSDIKLVHSVYSFIPRTRAPPINVRCSDRNFAYKMSQEWHDPWLKRLLTGFARISD
CNGPMKPTDSHPLIQEIDAELPITQPALQLTYKIFGSCPPMQPFDPAKMLTDSGKLQTLD
ILLKRLRAKNHRVLLFAQMTKMLNILEDYMNYRKYRYLRLDGSSTIMDRRDMVKDFQHRS
DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTKDVTVYRLICK
ETVEEKILQRASQKNTVQQLVMTGGHVQGDLLAPEDVVSLLIDDAQLEHKLKEVSQQAKD
RQKKKSGAKGIRIDAEGAASFEDFANAESQDYDFEPQDPEKTKSSSKKRKPSGDKQTQPK
ARVQKGSKQVDSSSPNRTIPDYEHEDPSQHTDSIQQRPKRLKRPTKSVNENIEPAFKAIQ
HQSSEL
NT seq
4521 nt
NT seq
+upstream
nt +downstream
nt
atggactccaaccggaagtataattacggaaatctcttcaatcttgagcctttgatgaac
tttcaactgccgaaacaagatgaagattttgattattatgggaatagtagtcaggatgag
agcagaggtgcccaagggggagctttaggcgacatgaatggaacaatatcggagagggga
tcgaaaaagaagcggcgtagtgcttatagcagtgacgaggaagaaacaggctgtcacagt
tcgtatatttcagaggagcggtatcgtgcaatgcttggagatcatattcagaagtacaaa
aggaggctcaattgtgccccccaaaatcctgcgtcgacaagaactgggacaatggcaatc
aaaagtaatgtagccctgaaagatcagaaatcaatgaatgataacagaggagggtttccc
aagtttgaatcaacttcagattttctaaacagtagtagttcccaaaaacttggaaattat
catgaatcagatttcgggcggcaatatggtgcctcaagaccaaatcttgaaccacctttt
ctggatattggggatggaatcacatataggattcctcttccgtatgaaaagctgtcatca
tcactaggtttgccaagtatgtcagatatccaagtggaggaattttacctaaagggtacc
cttgacttgggttcattagctgcaatgatggcgtctataaacaagtttcagcgtagaagc
agggcagggatgggtgatcaacggcctcagtatgaatcgcttcaggcaaggttgagagcc
cagcagaccaattacactgctgagaatttctctctaagtattagtgaaatagatatggga
accaatggcattccagaaggggcagctggaaggattaggcgatctatactgtcagaaagt
ggtatattacaggtttattatgtaaaagttttggagaagggggatacatatgagattatt
gaacgtggtttacccaagaagcaaaaggtgaagaaagacccttctgtaattgagagagaa
gcaatggaaaattttagtaaatattgggttaatatagcaagaaaagaaattcccaaacat
cacaggattttcaccaacttctacagaaagcaaataactgatgctaagagagtttcagaa
acatgtcaaagagaggtgaaaatgaaagtcagcagatccctcaaattgatgaagggtgct
ggaatcaggacaaggaaactggctagagacatgcaagtgttttggaagagagttgacaag
gagatggcggaagtgaggaaaagagaggaaaaagaagctgctgaagctctgaagcgagaa
caagaacttcgtgaagctaaaaggcagcagcagaggctcaactttctgttgtcacagaca
gaactgtacagtcacttcatgcagaataagacctcagagccctctggagcattagcagtt
ggtgatgacaaatctaatgaccaagaaattctttcagaagatcagcaccaggaggaagat
gatcctgaagccgctgaattaagaagagaagctctaagagcagcccacgatgcagtttca
aagcagaagaaaatgacaagtgcatttgataatgaatgcttaaagctacgtttagctgga
gaagctgaggcccctctccaagatggtgtggtcactgagtctagcaatattgatttgctg
cacccgtcaaccatgcctctagcatcaacagtgcagacgcctgagatgttcaagggttcc
cttaaagaatatcagctaaaaggccttcagtggcttgtgaattgttacgagcagggtttg
aatggtattcttgctgatgagatgggtctgggaaagacaattcaagccatggcgttcttg
gctcatttggctgaggaaaaaaatatatggggaccttttctggtggttgcacctgcttct
gtcttgaacaattgggctgatgaaatcagccgtttctgtcctgatctgaagactctacca
tattggggtggtcttcaggagcgtacagtgcttaggaaaaacatcaacccaaagcgtctt
tatcgaagggaggctggatttcacattctcatcaccagttaccagctgctggtttcggat
gagaagtacttccgccgtgtaaaatggcaatatatggtgttggatgaggcccaggctatc
aaaagttccaacagtataagatggaaaacactgctcagtttcaattgccggaatcgcttg
cttctgactggaactccagttcaaaataacatggctgagctgtgggcgctcttacatttt
attatgcccactttatttgatagccatgagcaattcaatgagtggttttcaaaaggaatt
gagagtcatgcagagcatggtgggacattaaatgagcaccagcttaatcgattgcatgcc
attctgaaacctttcatgctacggagggttaagaaggatgtggtctctgagctgacagga
aaaactgaagttaccgtacactgtaaactaagttctcggcagcaagctttttaccaagct
ataaagaacaagatatcccttgcagaattgtttgacggaaaccgtggacatcttagtgag
aaaaaaattctgaacctgatgaacattgtcatccagctgagaaaggtatgcaatcatcca
gaattatttgagagaaatgaaggaagcacgtattttcattttggcgatgttccaaattct
cttctccctcctcccttcggtgagctagaagacgtcttttattctggtggcaaaagccct
attgcatacgagataccaaaactggtctaccaagagactgctggtggttccaacgctcac
aactcagaagctggccagagtttaagtagagagtcaattcagaagttatttaacatattc
tcaccagacaatatctccagttcttcactccaaaaggattctggacgaagtggaacattt
gaattctcccgctttattgatctatcgccatcagaactgtcattcctggcaactggttct
tttatggagaggttattattctccataatgagatcagatcgccaacatttggatgaaata
ttggacctgttgatggaaagtgatgatggcgatatccagtatactaatattggcaagcaa
aaagtgagagctgtcacgcgaatgttgctactgtctagtaggtcagagaaaaactttctt
agaagaaagcttgcaacaggtccttcagattctccattcgaggctctaatcatgccttac
caggataggcttctatccgatatcaagcttgtgcattctgtgtactcgttcatccctaga
actagagcacctccaataaatgtccgctgttctgatagaaactttgcatacaagatgtct
caagagtggcatgacccctggttaaagaggttattgactggatttgcacgaatatctgat
tgcaatggcccaatgaaaccaactgacagtcaccctttaatacaagagattgatgctgaa
ttaccaattactcaacctgcccttcagcttacatacaagatctttggatcttgtccaccc
atgcaaccatttgaccctgcaaaaatgttgacagattctgggaagcttcaaacacttgat
atacttctaaagcgtctgcgggcgaaaaatcatcgcgttcttctttttgcacaaatgacc
aaaatgctgaatatcctcgaggattacatgaactataggaaataccggtatttgaggctt
gatgggtcatccacaataatggatcgccgtgacatggtgaaagatttccagcaccggagt
gatatctttgtgttcttgctgagcacaagagctggtgggcttggaatcaacttgacagct
gctgacactgtcatattttatgaaagtgactggaatccaacgttagatttacaggcaatg
gatcgggcccatcgtctgggtcaaactaaggatgtaactgtgtatcgcttaatctgtaaa
gagaccgtagaggaaaaaattcttcagagagcgagtcagaaaaacaccgtccagcagctt
gtgatgactggcggtcatgtccaaggtgaccttttggcccctgaggacgttgtatcatta
ttgatcgatgatgctcaactggagcataaactaaaagaagtctcacaacaggcaaaagat
aggcagaagaagaaaagtggtgctaagggcatcagaatcgatgcagaaggagctgcgtct
tttgaggattttgctaatgctgaatcacaggactatgactttgaaccacaagatcccgaa
aaaacaaaatccagcagcaaaaagaggaaacccagtggtgacaagcaaacacagccgaaa
gcaagagttcagaagggctccaaacaggtggattcatcatcaccaaatcgaacgataccg
gactatgaacatgaggatccctcgcagcacacggactccatacagcaaagaccaaagagg
ttgaaaaggccaacaaagagtgtgaatgagaacattgaacctgcattcaaagctattcaa
caccagagctcagaactatag
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integrated database retrieval system
