Salvia hispanica (chia): 125211984
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Entry
125211984 CDS
T09851
Name
(RefSeq) trans-Golgi network-localized SYP41-interacting protein 1-like
Organism
shis
Salvia hispanica (chia)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IFT20
Golgin_A5
Motif
Other DBs
NCBI-GeneID:
125211984
NCBI-ProteinID:
XP_047967924
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All DBs
Position
3:32336809..32345457
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AA seq
1855 aa
AA seq
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MEMEDNDERKGSPSAGEGEGFASVDATEAETAADSVDQIDPVTPSEGSALDSFQSLPKDT
MVAEDVVKEDTFVDCPDEIEVSEAQQNSEEKDNLQADQADESDSGIKVPEMIDEIEQLRD
KLEKSVSEKEKLAQDYEGERAVLTQELSQLLHQLKVSHEQRLAADGFINHYQNDFVTRDA
TTVGSVSSLHEIISDCSRLLEITTNERQQTEEKLSVQLETDRHIEETVNRILSSLPMVDH
HGQLWDRSLIEKVYSIEQSVAFVVQKYSILVSGSEQLKGCLNEVGLDFNNIDEIGTFSLA
HDKILELRRNEEDMHQKLSNLENENRNLGEQLEKQNSALENVNAEIQRLSAEVEQEKNRY
ANTKEKLSMAVTKGKALVQQRDSLRQLLQEKTSEFDRCTIELQEKSTALEAAEMAKEMVA
SSEKLAASLQESLAEKEMILQKCGEILSESLETKELQPTDIAETIRWLADENKSLKDISL
QYHKLTDALSSFDFPEVVASSELDVRVHWLAESFFVFKEEATKLQQELAKAIEAANEKIE
HLTTSLLAEIQEKTDLQTEVEALRNNHEAHERSQNEIAETKQSVNNEIERLTSSLLAESQ
EKGHLQEELENLRQKYEKVVEKEHQVSLEKDKIVGILLEASGLANDDHREAHPENTDTST
IIDHCVAKIRENASAAEPSLAKAELFESLTSLLYVRDLEMTLYKQIMEEGTSEREQVCQL
SEELKMKTLELNSLKDEKAAMQKSLDQLEDRCALVKEKLSMAVKKGKGLVQERENLKCSI
NEKNAEIDNLKSELQRYVAKCAEFQEQILKLLVDVERISLLERDLASTTEQKDQLEQFLT
ESNNMLQRVTQSIEGISTPTDLFFNEPAEKLRWLAEYLSDSEISKTQIEQELRSVNDEAS
LLASQLSEAQAMIKSLEDALSVVEKSRSDLLDEKNELEVSKALLEEELQKEKENASSYTS
KYDELLVSSKALEDTLSITEENVSRLTNERDVALESKSLAEEQLNKLKEMLSVNVKKLDD
ADKIILSLEDELSQAQKNASLLVEENSKVQTVQADLDGEIKRIREEADLLATKLSESSIT
IQSLEGELLNSQNNMADLVQEKENAEKEINSLTSKLESCMKELSGNQSSIQSRSLELSGQ
IDSLQLLLKDETLSTLHGQCFQRKFESLKSLDFLIKEIWNCSLEMDSEMPQNSPIVKDDS
FLSTTFPSYTDIAPNLEMLNGEGNAVDGESMFDIENMVKRYHVRSKILADNFNKLSTLFD
ESMDALLRGLNLRKDEIVNAMKYKSSLKDQVKDIETDKKRQEDTIASLERDIRSLVSACT
DATHGLELNNKEAVSKLISIDELVNLDGRIPIDSEADNDDEEITLATDHVKTARKLILAA
RRNQDLGMVFQDAISKLMNMTGNMQNKLKEAQKTSDEILEERDLFKDKILKLETDLKEQQ
SLHHEMTIKLEDMRSKLRETQVTCDEALEERDLYKEKILISETDMKAQQDEINEIAIKLE
DQRKREAELSSSLSKFRDREAELSSSLSKFHELEETLSASQVKSVLDKIKLVNFPDGAFA
FGDSDKSASVRKLFYVIDSFSDYMETVSSLSHQNGELQSTIDKQILDMEQLKRQVEEHAS
NEKNSDKLNKLLELESGLQLIAKKLGAGDVMDDSKVNGELWLLPLLEKLVAAVMHESETL
KLKNEDLGAKLLGAQKAVDDLSNKVKLLEGTTKSRAILPEVDQERGKSVASLSTQTEIAE
MQDVAGLGKGNNIPSVSSAAHVRPLRKGSNDHLAINIESESEWLINDKGREDDKGHAFKP
LVTSGMIPRQGRTVADRIDGFWVNGSRALMSHPRGRLGVIAYWLVLHIWLFGTLL
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaagataatgacgagagaaaaggctctccatcagctggggaaggagaggga
tttgcttctgtcgatgcaacagaagctgagacagctgccgattcagttgatcagatagat
cccgtcaccccaagcgagggatctgcattagattcttttcaaagtttaccaaaagacaca
atggtagcagaggatgtggtaaaggaagatacatttgttgattgtccggatgaaatagaa
gtttccgaagcccaacagaattctgaggagaaggataatttacaagctgatcaagctgat
gaatcagatagtggaatcaaagtccctgaaatgatagatgagatagaacagttgcgggat
aagcttgagaagagtgtttctgagaaagagaaattggcacaagactacgagggtgaaaga
gcagtgcttacacaagaactttcccaacttcttcaccagctgaaggtttcgcatgagcaa
cgccttgcagcagatggattcattaatcattatcagaatgacttcgtgactcgggatgca
acaactgtgggatctgtttcctctttgcatgagattataagtgattgctctaggttgctt
gaaatcactaccaatgagcgtcagcagaccgaggagaaactgagcgtgcagcttgagact
gatcggcatattgaggaaactgtaaacaggattctatcatcccttcccatggtggatcat
cacggtcaactgtgggacaggtcgctcatagaaaaggtatatagtatcgagcaatctgtc
gcatttgtggttcaaaagtatagtattcttgtttctggaagtgaacagcttaagggatgt
ttaaatgaggtaggattagatttcaacaacattgatgaaatcggaactttttccttggcc
catgataagattctcgaactcagaagaaatgaagaggatatgcaccaaaaacttagcaat
ttagaaaatgaaaataggaatttgggggaacagttagagaaacaaaactcagctcttgaa
aatgtgaatgcagaaattcaaagacttagtgccgaagttgaacaagaaaagaacaggtat
gcaaacacaaaagagaagcttagcatggctgtgacaaaaggaaaggcattggtacaacag
agagattcgctaaggcagttgttacaagagaaaactagtgagtttgatagatgcacaatc
gaactccaagagaagtcaactgccttagaggctgcagaaatggcaaaggaaatggttgca
tctagcgaaaaattagctgcttcgctgcaagagtctcttgcagagaaggaaatgattctt
cagaaatgtggagaaatattatccgagagtttggaaactaaggaacttcagccaacggat
atcgctgaaacgatcagatggcttgcagatgaaaacaaatcactcaaggatatatcttta
caatatcataaactgactgatgcgttatcgtcctttgattttcctgaagtagtggcttca
agtgaattagatgtgcgtgtccattggcttgcagaatcattttttgtgtttaaagaagag
gctacgaagttgcaacaggagctagctaaagcaatagaggctgcaaacgagaagatagag
catcttaccacatcacttttagctgaaatacaagagaaaactgatcttcaaacagaagtg
gaggccttaagaaataatcatgaagctcatgaaaggtcacaaaatgagatagctgaaact
aagcagtctgtaaacaatgagattgagcgcctaacatcgtctcttttagcggaatcacag
gagaagggccatcttcaggaggaactggagaacctgagacagaaatacgaaaaagtagtg
gaaaaggaacatcaggtttcactggagaaggataagatagtaggcatattgctggaagca
tctggacttgcgaatgatgatcacagagaggctcatccagagaacactgatacgagcacc
attatcgatcattgtgttgcaaagattagggaaaatgcatctgctgctgaaccttcacta
gcaaaagcagagttatttgaaagcttaacaagtcttctgtatgtcagagatctggaaatg
actctatataagcaaataatggaggaaggtacatcagaaagggaacaggtctgtcaattg
tcggaggagttgaaaatgaaaactctagaacttaattcactcaaggatgagaaagccgcc
atgcagaaaagccttgatcagttagaggatagatgtgctttagtgaaggagaagttatct
atggcggtcaaaaaaggcaagggactcgttcaagaacgggaaaacctgaaatgttctata
aatgaaaagaatgctgaaattgataatttgaagtctgaactgcagcgatatgtggccaaa
tgtgctgaattccaggaacagatcttgaagttgttagttgatgtagaacgtatatctcta
ttggagagagacttagcctctaccacggaacaaaaagatcaacttgagcagttcttaaca
gagagcaacaatatgctacaaagagttacacagtcaattgaaggcattagtactccgact
gatctcttcttcaacgagcccgcagaaaagttgagatggctcgctgaatatctcagtgat
agtgaaatttcaaagacacaaattgaacaagaactgaggagtgtaaacgacgaagccagt
ttgttggccagccaattgtccgaagcccaggcaatgataaaatcacttgaagatgcctta
tccgttgtagaaaaaagcaggtctgatctcttggatgaaaagaacgaacttgaggtttcc
aaggctctcttggaggaagagctgcagaaggaaaaagagaacgcttcttcatatacaagc
aagtatgatgagcttcttgtgagttcaaaagctcttgaagatactctgtcaataacagag
gagaatgtttccaggttaacgaatgagagagatgtagcgttagaaagcaaatctcttgct
gaagagcaacttaataaattaaaggagatgctctctgtcaatgttaaaaaactggacgac
gccgacaaaattattctgtcccttgaagatgaattgtctcaggcacagaagaatgcctca
ctacttgttgaagaaaacagcaaagttcaaactgtccaagctgatttggatggtgagata
aagagaattagagaagaagctgacttgcttgctaccaagctttctgaatcctctataaca
atccaatcgcttgagggagaattactaaattcacagaataacatggcagatctggtgcag
gaaaaagaaaatgctgagaaagagataaattcacttacctctaaactggaatcttgtatg
aaagagttatctggcaaccaaagtagcatacagagtcggagtttagagctctctggtcag
attgacagtcttcagttacttctaaaagatgagacgctttcaaccttgcatgggcaatgt
ttccagagaaaatttgagagcctaaagagcttagattttctaattaaagagatctggaac
tgttcactggagatggactctgaaatgccgcaaaacagtcctatcgtgaaggatgattcg
ttcctttcaactaccttcccgtcttacactgatattgctccaaacttggaaatgttgaat
ggtgagggaaatgcagtcgatggtgagagcatgtttgacattgagaacatggttaaaaga
tatcacgtgagaagcaaaattctggctgataatttcaataagctgtccacactttttgat
gaatctatggatgctctgttgagagggttaaacttaaggaaggacgaaatagtcaatgcc
atgaaatataaatcctctctcaaagatcaagtcaaggacattgaaacagataagaagaga
caggaggatactatagcgtcactggaacgtgatatcagaagtttggtgtctgcctgtacc
gatgccactcatggattggagttgaataataaggaagctgtgtccaagctgatatctatt
gatgagttggtaaatctagatggcagaattcccatagattcggaagcagataatgatgat
gaagagataacacttgctactgaccatgtaaagacggctcggaagctaatacttgctgca
agacggaatcaagatcttggtatggtgtttcaggatgctataagtaagttgatgaatatg
acagggaatatgcagaacaaactgaaagaggctcagaagacttccgatgaaatcttggaa
gagagagatctgttcaaagataaaatcttgaagttggagactgatctgaaagaacagcaa
agcttgcatcatgagatgactatcaaactagaagatatgcggagcaaactgagagaaact
caagtaacttgtgatgaagccttggaagaaagagatctgtacaaagaaaaaatcttgata
tcagaaactgatatgaaagcacagcaagatgaaattaatgaaatagcaatcaagctagaa
gatcagaggaaaagagaagcagaattgtcttcttcattatccaaatttcgcgatagagaa
gcagaattgtcttcttccttatccaaattccacgaactggaggagactttatcggcgtct
caagttaaatccgttcttgataaaataaaactggtcaatttccctgatggtgcatttgcg
ttcggagattcagataagtcagccagtgtaagaaagctgttctatgtgatagacagtttt
agtgactatatggagacggtaagctcgctatctcatcagaatggagagcttcagtcaacc
attgataagcagatacttgacatggaacagttgaagaggcaagtcgaagagcatgcgtcc
aatgagaaaaattccgataagctgaacaagttgttagagctggaatcaggtttacagctt
attgcgaagaagctgggtgccggtgatgtgatggatgattccaaagtaaatggggaatta
tggctccttcccttgctcgaaaaactagttgcagctgtgatgcacgaatctgaaactttg
aagctaaaaaatgaagatcttggtgctaaactgctcggggcccaaaaggctgtggatgat
ttgtcgaacaaggtaaaattactagaagggactactaaatcgagagccattctaccagag
gtagaccaggaaagaggaaaatccgtagcttccttgtctactcagacggagatagcagaa
atgcaagatgtggcaggacttggcaagggcaacaacattccttctgtttcatctgctgcc
catgtgcgcccgttgaggaagggttcgaacgatcaccttgctatcaatatcgagtctgag
tccgaatggttgattaatgataagggacgcgaggatgataaaggtcatgcattcaagccg
ttggttacttctggtatgattcctagacaggggagaacagttgcagatcgcattgatgga
ttctgggtgaatgggagtcgagctttgatgagtcatccgagaggaaggctaggcgtcatt
gcgtattggctcgtcctacatatttggttattcggcacattattgtga
DBGET
integrated database retrieval system
