Salvia hispanica (chia): 125212033
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Entry
125212033 CDS
T09851
Name
(RefSeq) heat stress transcription factor B-2b-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125212033
Transcription factors [BR:
shis03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
125212033
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GFIT
Motif
Pfam:
HSF_DNA-bind
bZIP_1
HALZ
XRCC4_CC
Motif
Other DBs
NCBI-GeneID:
125212033
NCBI-ProteinID:
XP_047968001
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Position
3:34195459..34197076
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AA seq
350 aa
AA seq
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MALLPADRSGSGESTAGDSSRSLPTPFLTKTYQLVDDPAIDDVISWNEDGSGFIVWNPTE
FARDLLPKYFKHNNFSSFVRQLNTYGFRKVMPDRWEFSNECFRRGEKKLLCDIQRRKIAS
SSSVVVAAAAAAATVVLPTIAATRTVSPADSGEEQVISSSNSPARTRDFSGGTSELIGEN
ERLRKENSHLNKELSQMKNLCNNIFTLMSNYAGGGKSNNGGSSSSGDQQTHSCKLSVADN
AMKPLDLLPMTKFCEEMQTAVVAAAAANAAEESHIRSAAEEISARLFGVPIGMKRGREGE
GSSAEHGMDLQLQQPMGDVKSEPMDLESSGDDRESSWLTRCSSRNRRALN
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggctctgctaccggcggatcggagcggaagcggcgaatccacggccggcgattcatcg
cggtctcttccaacgccgtttctgacgaagacgtatcagctcgtggacgacccggcgatc
gatgacgtcatctcttggaacgaggatggatctggttttatcgtttggaatccgacggag
ttcgccagagatttgctccccaagtatttcaagcacaataatttctccagttttgtgagg
cagctcaacacctacggattcaggaaggttatgccggatcgatgggaattctccaacgaa
tgcttccggagaggtgagaagaagcttttatgcgacattcagcgccggaaaattgcgtca
tcgtcgtcggtcgtagtggctgctgctgcggcggcggccacggtggtgctgccaacaata
gcagcgacgcggacggtttctccggccgactccggcgaggagcaggtgatttcgtcttcc
aattcgccggcgaggacgcgcgacttcagcggcggcacatcggagctgatcggcgagaac
gagaggctgagaaaggaaaactcgcatctcaacaaagagttgagccagatgaagaatcta
tgcaacaatatcttcactctgatgtcgaattacgccggcggcggtaagagcaacaacggc
ggcagcagcagcagcggcgaccaacaaacgcacagctgcaagctctccgtggctgacaac
gcgatgaagccgctggatctcctcccgatgacgaaattctgcgaggagatgcagaccgcc
gtcgtggcggcggcggcggcgaacgccgccgaggagagccacatcagatcggcggcggag
gaaataagcgcgagattgttcggcgtgccgatcggaatgaagcgggggagggaaggggaa
ggtagctcggcggagcacggtatggatttgcagctgcagcaaccgatgggcgacgtgaaa
tctgagccgatggatctagagagcagcggcgacgatcgggagtcgtcgtggctgacgcgg
tgcagctcgagaaatcggagggctcttaattga
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