Salvia hispanica (chia): 125212228
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Entry
125212228 CDS
T09851
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
shis
Salvia hispanica (chia)
Pathway
shis03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
125212228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125212228
03036 Chromosome and associated proteins [BR:
shis03036
]
125212228
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
125212228
Chromosome and associated proteins [BR:
shis03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
125212228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
125212228
NCBI-ProteinID:
XP_047968285
LinkDB
All DBs
Position
3:complement(47203731..47213543)
Genome browser
AA seq
1029 aa
AA seq
DB search
MFGSNPFGQSSSSPFGSQPVFGQTSSATNNPFAPKPFGGNTSPFGSQTGGSIFGGMSTGV
FGAQSSSPFGSTSVFGASSSPAFGSATPTFGASTGSAFGNTSSAFGGSSVFGQKPAFGGF
GSNTTQSSPFGGSFQQSQPASGSNLFGSSTPFGAPSQPAFGASSSPAFGAPSTPAFGATS
TPAFGSTASPTFGSTSGGFGASSSPFGSSTPAFGASSTPSFGASSTPAFGATASPAFGAT
SSPAFGATTTSAFGASSTPSFNFGSSPAFGQSTSAFGQSTSAFGSSPFGATSSFGAQSTS
FGAQTTTPAFGNSGFGQTAFGGQRGGSRVTPYSATPETDGATGTQPAGKLESISAMPVYK
DKSHEELRWEDYQLGDKGGPAPAGQATAAPGFVAPFSATPTPSFGQSSTNPFSSSTPSNL
FAPKTPAFNNSGFAPSTGSAFSSSPFGTSNTTNPFGSTSSTTTTSLFGAAQPFGANTSSS
LFNSSSPSPFGSPSIFGSSSSQGTGTAFGTSLGFGNTQSSPLFQSTTPTLGQSSSPFGQT
TAFGQTTSGFGQSNLFPTPSTGFTGNLFASSSSLPSSTGGALGFGQTTPSISTPFQSAQP
APGSFNFSNFGQSQAAAPSGFTGTPGMFSNTAFGQAPGTQTAVAAQAAPITNPFGTLPTM
PQVSIGRAGISPSVQYGISSLPVVEKPVPVRISSLLTSRHLSQRRVKLPVRKYHPKSNGP
KVPFFNDDEETASTPKADALFVPRENPRALVIRPLEQWHSRSSAEKTKTTGTPMRENGEL
HDDGYNSMNGNRNKDASPREDSVENGLAKEQANPVKGNQKANGVHNGLSTEKGDSYITLT
GHRAGEAAIVYEHGAGIEALMPKLRHSDYYTEPRIQELAAKERAEPGYCRHVKDFVVGRH
GYGSIKFFGETDVRRLDLESLIQFNNREVIVYMDESKKPPVGQGLNKPAEVTLLNIKCFD
KKTGQQYVEGPRIGKYKEMLKRKAEDQGAEFVSYDPVKGEWKFRVNHFSAYKLGDDEDES
CENVLTCFS
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgttcggaagcaacccttttgggcagtcgtctagtagcccatttgggtctcaacctgtt
tttgggcaaactagcagcgctactaacaatccttttgcccctaaaccttttggtggcaat
actagcccttttggttcgcagacagggggttctatttttggcggcatgtctactggtgtt
tttggtgcccaatcttcttctccttttggatccacttctgtttttggtgcttcctcatca
cctgcttttggaagtgcaaccccaacctttggagcttccacagggtctgcatttggaaac
acatcttcagcatttggtgggtcctcagtatttggacagaagcccgcatttggtggtttt
ggatctaatactactcaatcaagtccttttggtggttcattccagcaatcacagcctgcc
tctgggagcaatttatttggctcatcaacaccttttggtgctcctagtcaacctgccttt
ggtgcgtcaagtagtcctgcatttggggcacccagtactccagcttttggtgcaactagc
acccctgcctttggttctactgcaagcccaacatttggcagcacaagtggtggctttggt
gcgtcaagttctccttttggatcaagcactccagcatttggtgcttcttccactccatca
tttggggcttctagcacgccagcttttggcgccacagcttctcctgcttttggtgcaaca
agcagtccggcttttggtgccacaaccacttctgcatttggtgcttcaagtactccgtca
tttaatttcggatcaagtcctgcatttggccaatcaacatccgcatttggccaatcaact
tctgcatttggaagtagtccatttggtgcaacatcatcctttggagctcaaagtacttca
tttggagctcagactacaacgcctgcatttggtaactcaggatttggccagactgctttt
ggagggcaacggggcgggagtagagtaactccatactcagcaacacccgagacagatggt
gccacaggtacacagcctgctggaaagctagaatctatctcagccatgccggtctataaa
gataaaagccatgaagaacttagatgggaggactaccagttaggagataaaggagggcca
gctcctgccggtcaggctactgctgctcctggatttgttgctccattttcagccacacct
actccttcatttggccagtcatccacaaatcccttttcatcttcaacaccttccaatcta
ttcgctcctaaaacaccagcgtttaacaattcaggctttgcaccttcaactggttctgcc
tttagttcttcaccttttggaacatcaaatacaactaacccttttggctctacatcatca
acaacaacaacctccttatttggtgcagctcaaccatttggagccaatacctcttcttct
ctttttaactcttcaagcccatctcctttcggatcaccatctatttttgggtcttcatca
tcacaggggactggaactgcatttggtaccagcttggggtttggtaacactcagtcttcc
ccattattccagtcaacgacacctacacttggacagagtagttcaccttttggacagaca
actgcatttggtcaaactacctcaggttttggtcagtcaaatttgtttcctacaccctct
acgggttttactggcaatctgtttgcaagcagttcatcactgccaagcagcactggtggc
gccttgggatttggtcaaacaactccttctatttctactccatttcaatcggcacagccg
gctcctgggagcttcaacttcagcaattttggccagtcacaagcagctgctccaagtggc
tttactggcacccctggcatgttcagcaatactgcttttggacaagcgccaggcacgcaa
accgcagttgctgcacaagcagctcccattacaaatccctttggaactttacctacaatg
cctcaagtgtcaattggtcgcgcggggatttccccttctgttcagtatgggatttctagc
ctgccagttgttgaaaaaccagttcctgtaagaatatcctctcttttaacatctcgacac
ctctcccaaaggcgtgtaaagcttccagttaggaaatatcaccctaaatccaatggccca
aaggtgcctttctttaatgatgatgaagaaacagcaagcacaccaaaagcagatgctctg
tttgtgccaagggagaatccaagagctctagtgatccgtccactggaacagtggcattct
agatccagtgcagagaaaacaaagaccactggcactcccatgcgtgaaaatggtgagctt
catgatgatggctacaattccatgaatgggaacaggaacaaagatgcttccccaagagaa
gattcggtggaaaatggcctggctaaagaacaagccaatcctgtaaaagggaaccagaaa
gctaatggtgtccataatggtctttccacagagaaaggtgactcatacataactcttaca
gggcatcgagctggtgaagctgctatagtttatgagcatggagctggaattgaggcgctg
atgccaaagctccgccactctgactattataccgagccacggatccaggagttggctgca
aaggaaagggctgagccaggctattgtcgccatgtgaaggattttgtagtgggaaggcat
ggatatggtagcatcaagttctttggggaaactgatgtgcggaggctagatctcgagtct
ctgatccaattcaacaatcgtgaggtgatagtttacatggatgagagcaagaaacccccc
gttggacaaggtctgaacaagcctgctgaggttacactcctaaacataaaatgcttcgat
aagaagacaggtcagcaatatgtggaggggccaagaatcggcaagtacaaagagatgctg
aaaagaaaagctgaggatcaaggtgccgagtttgtttcttatgatccagtgaaaggagaa
tggaagttcagagtcaaccatttcagtgcatataagcttggcgatgacgaagatgaaagt
tgtgaaaacgtgcttacttgttttagttga
DBGET
integrated database retrieval system
