KEGG   Salvia hispanica (chia): 125212565
Entry
125212565         CDS       T09851                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
shis  Salvia hispanica (chia)
Pathway
shis03010  Ribosome
shis04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:shis00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    125212565
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    125212565
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:shis03011]
    125212565
   04121 Ubiquitin system [BR:shis04121]
    125212565
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:shis04147]
    125212565
Ribosome [BR:shis03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    125212565
  Archaea
    125212565
Ubiquitin system [BR:shis04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   125212565
Exosome [BR:shis04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   125212565
  Exosomal proteins of colorectal cancer cells
   125212565
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD Ubiquitin_5 UBL_UBAC1 DUF2604 Thioredox_PDIA6_C Fer2_3 OTU1_UBXL
Other DBs
NCBI-GeneID: 125212565
NCBI-ProteinID: XP_047968727
LinkDB
Position
3:5660626..5661346
AA seq 156 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE
CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD
NT seq 471 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtcaaaaccctaacgggtaagacgatcaccttggaggtcgaatcctcc
gacacaatcgacaacgtcaaggccaagatccaggacaaggagggcatccccccggaccag
cagcgcctcatcttcgccggaaagcagctcgaggacggccgcaccctcgccgactacaac
atccagaaggagtccactctccacctggtcctccgcctccgcggtggcgcgaagaagcgc
aagaagaagacgtacaccaagccgaagaagatcaagcacaagcataagaaggtgaagctc
gccgtgctccagttctacaaggtggatgactccggcaaggtgcagaggctgaggaaggag
tgccccaacgccgagtgcggcgcgggaactttcatggcgaatcactttgacaggcactac
tgtggcaagtgtggattgacctatgtctacaataaggccggcggtgattga

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