Salvia hispanica (chia): 125212620
Help
Entry
125212620 CDS
T09851
Name
(RefSeq) high mobility group B protein 6-like
KO
K09273
upstream-binding transcription factor
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
shis03000
]
125212620
03021 Transcription machinery [BR:
shis03021
]
125212620
Transcription factors [BR:
shis03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
125212620
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
125212620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
CHDNT
Knl1_RWD_C
KRAB
Motif
Other DBs
NCBI-GeneID:
125212620
NCBI-ProteinID:
XP_047968789
LinkDB
All DBs
Position
3:560347..562494
Genome browser
AA seq
466 aa
AA seq
DB search
MAAVAENPTFAEPAPTKKGRTKKALKPKAVSSNEANIAAGEVPEHSPVAAKGKQQPSNAS
YFEKQLQEMQEQLEKLKIEKEQTEEMLKAKEEQLETRDREQEKLKIELRKLQKIKEFKPT
VTFPLGLGIKDLEQEKKEKKKGGKKKPSPPYVLWCKDQWNEVKEANPDADFKAMSNLLGA
KWKFVSAEEKKPYEERYQAEKEAYLKIAGSEKRELDAMKLLEEEQKHKTAMELLEQYLQF
KQEAEKENNKKTKKEKDPLKPKHPMSAYFIFSNERRAALLAENKTVLEVAKITGEEWKNM
TDVQKAPYEEIALQNKEQYAEEMEAYKQKKEEEAANLKKDGEEFMKLQKQEAMQLLKKKE
KTETLIKKEKVSRQKKKSEEKTVDPNKPKRPASSYLLFSKETRKSLAEERPGTNNSTITA
LISLKWKELSEEEKQVWNEKAAEAMEAYKKELEAYNNNLAEKNEDN
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgtagcagaaaaccctacatttgctgagcctgcgcccacgaagaaggggaga
accaaaaaagcgttgaagcccaaggctgtctcgtcaaatgaggcaaacatcgccgcgggg
gaggttccggagcactctcccgtcgccgcgaaggggaagcaacagccttccaatgcgtct
tatttcgagaagcagctgcaggaaatgcaggagcagctcgagaaattgaagatcgagaag
gagcagaccgaggagatgttgaaggccaaggaggaacagctcgagactcgagatcgcgag
caggagaagctcaaaattgagctcaggaaattgcagaagatcaaggagttcaagcctaca
gtgacattccctctagggctcggaatcaaagacctagagcaagagaagaaggagaaaaag
aagggcgggaagaagaagccgtctcctccttacgtgctgtggtgcaaagaccagtggaat
gaggtgaaggaagctaatccagatgctgatttcaaggccatgtcgaatctgctgggtgcg
aaatggaaatttgtctccgcggaagagaagaagccttatgaagagaggtaccaagctgag
aaggaggcctatttgaagattgcagggagcgagaagcgtgagctcgatgcgatgaagctt
ctcgaagaagagcagaagcacaagactgcaatggagctgctcgaacagtacctgcagttc
aagcaggaggcagagaaagagaacaacaagaaaacaaagaaggagaaagatcctttgaag
ccgaagcatccgatgtcggcctacttcatcttctcgaatgagcgcagagcagctctgctt
gcagaaaacaagactgtcttggaggttgcaaagatcacaggtgaggagtggaagaacatg
accgatgtacagaaagccccctatgaagagatagcattgcaaaacaaggaacaatatgcg
gaagagatggaagcttacaaacagaagaaggaagaagaagctgctaacctcaagaaagat
ggggaagagttcatgaaactccagaagcaagaagctatgcaactgctcaaaaagaaagag
aaaactgaaactttgatcaagaaagagaaagtgagtcgccagaagaagaagagcgaggag
aagactgttgatccgaacaagccaaagcgccctgcctcgtcctaccttctcttcagcaag
gagacgaggaagagtttggcggaagagcgtcccgggaccaacaattctactatcactgcg
ctcatttcgctcaagtggaaggaattaagcgaggaagagaagcaggtttggaatgagaaa
gctgcggaggcaatggaggcatataagaaagaattggaagcatacaacaataatttggca
gaaaaaaacgaagataattag
DBGET
integrated database retrieval system
