Salvia hispanica (chia): 125212958
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Entry
125212958 CDS
T09851
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
shis03041
]
125212958
Spliceosome [BR:
shis03041
]
Common components
Common spliceosomal components
General mRNP proteins
125212958
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
Motif
Other DBs
NCBI-GeneID:
125212958
NCBI-ProteinID:
XP_047969226
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All DBs
Position
3:14244810..14251827
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AA seq
621 aa
AA seq
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MDFDEYDYLEKAVEETNGSPKGSPEAEKERERSDKGYRRRDRSEDDELDEDEKERRSSSK
KSRNGDSSREREKDKGRDVDRNRERERDRDRDRERDKDRDRDRERSSRHRSGERDSERER
RSSREKDKERERDRDRGKERKERDGEKEKERERRDRDKERERERRSRSRSQVDRDGERER
RSHSRSRLDRDRERDVERRSRSRSRLDRERERELLRDKEREESRSARLVVKLRFKDKREA
VEPEADPERDQRTVFVYQMPLKATERDAFEFFSQAGKVRDVKLIMDRNSRRSKGVGYIEF
YDAMSVPMAIALSGHLFLGQPVMVKPSEAEKNLVQSNTSAGGSVTGPYGATDRKLYVGNL
HFNMTEFQLRQIFEAFGPVELVQLPTDPETGHCKGFGFVQFGQLEHAKAAQSLNGKLDIA
GRTIKVSSVTDHVGVQDSGTKTADFDDDDGGGLALNAQSRAMLMAKLDRSGIASSVVGTL
GVPAFNGAAPSQQSITMPINPTAVLPNAVLPAQVASMAPEPIGTPSECLLLKNMFDPATE
SDPEFDLDIRDDVQEECSKYGRVKHAYVDKNSAGYVYLRFESVEAASRAQQAMHKRWFAR
RLISAIFLQPYEYDAKFKGAP
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgacgagtacgactacctcgagaaagcggtggaagaaaccaacggctcaccg
aaggggtctccagaggcagagaaggagagagagaggagcgataaggggtacagaaggaga
gacaggagtgaagatgatgagctcgatgaagatgagaaggagaggagaagcagcagcaag
aaatcgaggaatggtgacagcagccgtgaaagagagaaggataagggtagggatgtggat
aggaatcgcgaaagagaaagggatagggacagggacagagaaagggataaggatagagac
agagacagagaaaggagctcgaggcatcggagtggagaacgggattcagagagagagagg
cggagctcgagggagaaggataaagagagggaaagggatagggatagaggcaaggagagg
aaagagagggatggagagaaggaaaaggagagagagaggagagatagggataaggagagg
gagagggagaggaggagccgcagcaggagccaggtagaccgtgacggagagagggagagg
aggagccacagcaggagtcggttagaccgcgacagagagagggatgtggagaggaggagc
cgcagccggagtcggttggaccgtgaaagagagagggagttgttgagggataaggagcgt
gaggagagcaggtcggcaaggcttgtggtgaagctgagattcaaggacaaaagagaagct
gtagagcctgaagccgatccagagagggaccagagaactgttttcgtatatcagatgcct
ctgaaggcgaccgagagggatgcatttgagttcttttcacaagctggaaaggtcagggat
gttaaattgattatggatcgaaactcgaggagatccaaaggagttgggtacattgaattt
tatgatgctatgtctgtaccaatggctatagctttatctgggcacctatttcttggacaa
cctgtaatggtgaaaccttcagaggctgaaaagaatcttgttcaatcaaacacttctgct
ggtgggtcagttactggaccatatggtgcaacagacaggaagctttatgtaggaaattta
catttcaacatgacagagtttcagctcagacagatttttgaggcttttgggcctgttgag
cttgttcaactaccaacagatcctgagacgggacattgcaaaggtttcgggtttgtccaa
tttgggcaacttgaacatgcaaaggcagcacaaagtttgaatgggaagctagatattgct
ggtcggaccattaaggtatcctcagttactgatcatgtcggagtacaagattctggaaca
aaaactgcagattttgatgatgatgatggaggtggtttggctctgaatgctcaatccaga
gctatgctcatggcaaagctcgaccgcagtggtatagcttcaagtgttgtagggaccctt
ggagtgcctgccttcaatggagcggctccttcacagcaatctatcaccatgcccatcaat
ccaacagcagtccttccaaatgcagttcttcctgcccaggttgcttctatggctccagaa
cctattggaacacccagtgaatgtttgttgttgaagaatatgttcgatccagccactgag
tctgatcctgagtttgatctggacattagagatgatgtgcaagaagaatgttccaaatat
ggtcgtgtgaagcatgcatatgttgacaagaacagcgccggttatgtttatttgaggttc
gaaagtgtggaggctgcatcacgtgctcaacaggcaatgcacaagagatggtttgctcgc
agattgatttcggccatattcttgcaaccttatgaatacgatgccaaattcaaaggtgct
ccctga
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