Salvia hispanica (chia): 125212974
Help
Entry
125212974 CDS
T09851
Name
(RefSeq) two-component response regulator-like APRR5 isoform X1
KO
K12130
pseudo-response regulator 5
Organism
shis
Salvia hispanica (chia)
Pathway
shis04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
125212974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
CCT
KATNA1_MIT
Jas_motif
GMC_oxred_C
Motif
Other DBs
NCBI-GeneID:
125212974
NCBI-ProteinID:
XP_047969245
LinkDB
All DBs
Position
3:30558551..30563547
Genome browser
AA seq
702 aa
AA seq
DB search
MGQVVLSSEGGAVEMEAAAAKSDRRQNITSEAAENVAAAEDAAGSSSLVRWERFLPKLAL
RVLLVEADDSTRQIIAALLRKCSYKVAAVSDGLKAWEVLKARAENIDLILTEVELPSISG
YALLTLIMEHDICKKIPVIMMSSYDSVSIVYKCMLRGAADFLVKPVRKNELRNLWQHVWR
KQQSSGAGRVPPDESMAQQKIEATAENNATSNHSSQQKIEATAENNAASYHSSGYRACVQ
RNRECIEKGTDAQSSCTRPELETDEPDVEHLNSLLQPKTNKCLSDDVNKYVHKECQEEIK
RTRAHDNEGGGLQTVASIDVSNETTRGQDKNSASEQVNVNGQSAMNNHVREAIDLIGAFS
NCCKGTLASPASDTSTNKFDTLPLLDLSLRGSHPSGSVNQENDETHRINHSDASAFSRYV
NKSLPNSTSRSTCNQQKDPETNSEKQQSNHTPEYTSDAHGSRISSQKCASVTGIQPELLE
TPFSDPQLKETSQPFPVRGVRFENVINGLGAAMPEMHSAQSGLSPLPSPGAASNSQPFAY
SNPFHQTDHQAANTQSVRDLLDQRINCTMHQTDNKKGQEQETFEDTGHVSFANDQSRNSG
FYNSYTSHHHSIGSGDIGKINSISVVNATSDVASEDGVHVHDSTSSRSVQREAALKKFRL
KRKERCFEKKVRYESRRKLAEQRPRVRGQFVRHVHDDAQPGS
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgggacaagttgtgttgagcagtgaaggcggagccgtagagatggaagcagccgcagct
aaaagcgatcgccgccagaatatcacgtctgaagccgcggaaaacgtcgctgcggcggag
gacgctgccggcagctcatctctcgtccggtgggagaggtttctgccgaaattggctttg
cgagtgttgttggtggaagctgatgattccactcgacagatcattgctgcgcttctcagg
aaatgtagctacaaagttgcggcagtgtctgatggtttaaaagcatgggaggtattgaaa
gcgcgagctgagaacattgatcttattctgacagaagttgaattgccatcaatctctgga
tatgctcttctcactttaattatggagcatgatatttgcaaaaaaattccagtgataatg
atgtcttcgtatgactcggtcagtatagtttacaaatgcatgctgagaggtgcagctgat
tttctcgtaaagcctgtaaggaaaaacgagctcaggaacttgtggcagcatgtgtggagg
aaacaacaatcaagtggtgctggccgtgtacctccagatgagagcatggctcaacaaaag
atcgaagctacagccgagaacaatgctactagtaatcattcaagtcaacagaaaattgaa
gccacagctgagaacaatgctgctagttatcattcgagtggttatagggcatgcgttcag
agaaatagggagtgcatcgagaaaggaaccgatgcccagagttcatgcacgagaccagag
ctggaaactgatgaaccagatgttgagcatctaaattccctcttacaaccaaaaaccaat
aaatgcctttcagacgacgtaaataaatatgtgcacaaagaatgtcaagaagaaattaaa
agaacaagagctcatgataatgaggggggagggctgcagactgtggctagcatagatgtt
agcaatgaaacgacacggggacaggacaagaattctgcttcggaacaagttaatgtcaat
ggtcagagtgctatgaataatcatgtcagagaggctattgacttaattggagcttttagt
aactgttgtaaaggcactttggctagtcctgcctcagatactagcacgaacaagtttgat
actttgccactgttggatctgtctttgagaggatctcatcctagtggctcagtgaatcaa
gaaaatgacgaaacccacaggataaaccattccgatgcatcagcattctctcggtatgtc
aacaagtcattgcccaattccacatctcgaagcacttgtaatcaacagaaagaccccgag
accaattctgagaaacaacaatccaatcatacccctgagtatacttccgatgcacatggt
tcgagaataagctcacagaaatgtgcttctgtgactgggatccaacccgaactacttgaa
actccattttctgaccctcagctaaaagaaacatctcaaccatttccagttagaggcgta
agatttgaaaatgtgatcaacggcttaggtgctgcgatgcctgaaatgcattctgcacag
tctggcctgtcgcctttgcctagtccaggcgcagctagtaactcacaaccttttgcttat
tcgaatcctttccatcaaacagaccatcaagctgcaaatacccagagtgttcgtgacctt
cttgatcaaaggatcaactgtaccatgcatcagactgataataaaaaagggcaggagcag
gaaacttttgaggatacgggacatgtttcttttgccaatgatcagagtcgtaacagtggt
ttctataacagctatacaagccaccatcacagcataggttctggtgacatcggcaagatt
aattcgatctcagttgtcaatgccacatcagatgttgctagcgaagatggagttcatgtt
catgacagtacatcaagccgttccgtgcagagagaagcagctctaaaaaaattcagactg
aagaggaaggagagatgctttgagaagaaggtgcgctatgaaagcagaaggaagctggct
gagcagcgtcctcgtgtaagaggacagtttgtgcgtcatgtacacgatgatgctcaaccc
gggagctga
DBGET
integrated database retrieval system
