Salvia hispanica (chia): 125212998
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Entry
125212998 CDS
T09851
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125212998
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
125212998
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
125212998
NCBI-ProteinID:
XP_047969281
LinkDB
All DBs
Position
3:37741914..37753090
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AA seq
1633 aa
AA seq
DB search
MMQRGPTPGLSSQPLPEMEQLNNTQQPPPQQQQHRPSSSASSRAHHFHPARPAILELFNL
YLGRRSQQKSDESVREPPSVIHDHYHYQNKTQKRVTAINRELPPPNEQFLFDFEQIQSQF
PDQEQLRAVTESVLISLVIQCCNHAPRAEFLLFALRSLCNIGYINWDAFLPSLLSSVSSA
ETPVGQGSQAMALVACATSSQSGVPPPSNAIPNNANFQASNPASPLPSIHGIGSPAQSGA
EPSTLSPMKSNDVICTGQQSARANISVRENVISSLRQLSCKIILISLESNLMPVTRFDIF
NHMLNWLVNWDQRQQGLDEFDSAQFWKPDKALIEWLHDCLDVIWLLVDDNKCRVPFYELI
RSGLQFIENIPDDEALFTLILEIHRRRDMMATHMQMLDQHLHCPTFGTPRLLPQATTTGE
TVTNMRYSPITYPSVLGEPLHGEELAASIQRGSLDWERAMRCLRHAFRNTPSPDWWRRVL
LVAPCHRTQAQGPTPGAVFTSEMISEATIDRIVELLKLTNAETNCWQEWLIVSDVFFFLM
KHGCIDFVDFVDKLVCRLQDGDQHILRTNHVTWLLAQIIRVELVMNALNTDSRKVETTRK
ILSFHKEDRSADPNNPQSILLDFISSCQNLRIWSLNTSTREYLNNEQLQKGKQIDEWWRQ
VSKGERIMDYMNMDERSIGMFWVVSYTMAQPACETVMHWLTSAGVTEIPGTNLQPNERLM
VMQEVSPLPVSLLSGFSINLCLKLAYQMEESLFSGQVVPSIAMVETYVRVLLISPHALFR
SLMTLLSPKNQNPLSKPAASLLVFEILNYRLLSLYRYQGKNKGLIHDVTKIIATLKGKRG
DHRIFRLAENLCMNLILSMREFFSVKRDGKGPTEFTETINRITITTLAIIIKTHGIAEVE
HLLYLQTILEQILATSQHAWSEKTLRHFPPILREALAGRIDNRGLATQAWQQAETTVLNQ
CTQLLSSSADPTYVMTYINHSFPQHRQYLCSGAWILMYGHPESINSIHLGRVLREFSPEE
VTANIYTMVDVLLHHFNLELQCGRSLQELMMKACANLAFFIWTHELLPLDILLLALIDRD
DDPHALRIVISILDSKELQQRVKLYLMNRGPAEHWLYSGVFKRTELQKALGNHLSWKESV
SRYPTFFDDIAARLLPVIPLIIYRFIENDAFDAADRVLHVYASFLHYYPLNFTFVRDILA
YFYGHLPSKLIIRILTVLDVKKIPFSEAFPQHINSSNAPPLDYFATLLLGLVNHVIPPLN
NSSKNGQVGEASNASVRAPHNKAQATSQGGPSVAPEGQKPFYQLQDPGTYTQLILETAVI
EILSLPITASQIVSSLVQIVVHIQPTLVQSSNGTSVGQSSVLPTSPSGGSTDSLGATRTP
TAAGLSNSNFVWRSGYTCQQLSCLLIQACGLLLAQLPPEFHIQLYIEAARVIKESWWLSD
GKRSVSELESAVCYALLDPTWAAQDNTSTAIGNVVALLHAFFSNLPLEWLEGTHLIIKHL
RPVTSIAGLRIAFRIIGPLLPRLANAHTLFNKTLSVLLSVMADVFGRNSQPSAPVQASEI
ADIIDFLHHIVHYEGQGGPVQASSKPRAEVLALIGRAAESFSPDVQHLMTHLKADVNCSI
YAATHPKFVQNGS
NT seq
4902 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagcggggtccgactccgggcctctcttcccagcccttgccagagatggaacag
ctcaacaacacgcaacagccgccgccgcaacaacaacagcatcgaccttcttcctccgcc
tcttcccgtgcccaccatttccaccccgcccggcccgccattctagaactcttcaatctc
tacttgggcaggagatcgcagcagaaatcggatgaatcagttagggaacccccgtcagta
attcacgatcattatcattatcagaacaagacacagaagcgggttaccgctattaacaga
gagcttcctccccctaatgagcagttcctctttgactttgagcagatacagagccaattt
cctgaccaggagcaactacgcgctgtaacagaatctgtcctaatatctcttgttattcaa
tgctgtaatcatgctcctagagcagagtttctgctctttgctttgcgtagtttgtgcaat
ataggatacataaactgggatgcattcttgccgtctcttctttcttcagtttcttctgcg
gagaccccggttggtcagggcagtcaagctatggctcttgttgcttgtgcaacttcatca
cagtcaggagtcccaccaccttccaatgccattcctaataacgctaattttcaggcatct
aatcctgcgtctcctttgccgtcaattcatggcattggatctcctgcacaatcaggtgct
gagccatccacgctgtctccgatgaagtcaaatgatgtcatctgtactggtcaacagtca
gcgagggccaatatatcagtcagggaaaatgttataagcagtttacgtcaactttcctgc
aagataattttgattagccttgagtctaatctaatgccagtcacacgcttcgatatcttt
aaccacatgttaaattggcttgtcaattgggatcaaagacagcaagggcttgatgaattt
gatagtgcacagttctggaagcccgataaggccctaattgagtggttacatgattgtcta
gatgttatttggctgttagttgatgataataaatgccgtgtgcccttttacgagctcata
cgcagtggtttgcaatttattgagaacataccagatgatgaggcactgtttacccttatc
ttggaaattcatagaaggagagatatgatggcaacccacatgcaaatgttagatcaacat
ctacattgccctacatttggaactcctcgactcttacctcaggcaactaccactggtgag
acagtgacaaacatgagatattcaccaatcacatatccaagtgtacttggagaacctttg
catggagaggaacttgcagcatccattcagagaggaagtcttgactgggagcgagctatg
cgatgtctgagacatgcctttcgcaacactccatctccagactggtggagacgtgtattg
cttgtagcaccctgccacaggactcaggcccaaggacctacaccaggtgctgtttttact
tcggaaatgattagcgaggcaacaattgataggattgtggaattgctgaagttgacaaat
gcagaaacaaattgctggcaggagtggcttattgtttctgatgtattcttttttctcatg
aagcatggatgcattgattttgttgattttgttgacaaactagtgtgtcgacttcaagac
ggtgatcaacatatcctcaggaccaatcatgttacatggttgcttgcacaaattatccgt
gttgagcttgtaatgaatgctctaaatacagactcaagaaaggtggagacaacccggaaa
attctttcattccataaagaagaccgaagtgctgaccctaataacccacaaagtatcttg
ctggacttcattagcagttgtcagaatttgcgtatttggtcattaaatacatcaactaga
gaatatttgaacaacgagcagcttcaaaagggaaaacaaatcgatgaatggtggaggcaa
gttagcaaaggtgaaaggatcatggactatatgaatatggatgaaaggtcaattggtatg
ttttgggttgtctcatacactatggcacagcccgcttgtgaaacagtcatgcactggtta
acctcagctggagtaacagagataccaggaacaaatctacagccaaatgaaaggttgatg
gtgatgcaggaagtcagcccattgccagtatcgctgttatctgggttttcaataaattta
tgtctgaaacttgcatatcagatggaagagtctttgttttctggacaggttgtacctagc
attgcaatggtagaaacatacgttcgagtattgctcatttcacctcatgcactatttcgc
tcactcatgacgctactgtctccgaagaatcaaaacccactgagtaaacctgctgcttct
cttctggtgtttgaaattctgaactatcggttactttcactctacaggtaccaagggaaa
aacaaaggtttaattcatgatgtcacaaaaattattgctacactgaagggaaaacgtggt
gaccatcgtatttttcggctggctgagaatttatgcatgaatcttatattatcaatgagg
gaatttttctctgtgaagagggatggaaagggtccaaccgagtttacggaaactataaat
cggataacaataaccactcttgccatcattattaaaactcatgggattgcggaggttgaa
cacctgctataccttcaaacaattctggaacagatacttgccaccagccaacatgcatgg
tcagagaagaccctccgccacttccctcctattttgcgagaggccttagctggtcggata
gataataggggcttggccactcaagcatggcaacaggcagaaacaactgtgctcaatcaa
tgcactcagcttctatcttcatctgctgatcctacgtatgtcatgacttacattaatcac
agttttcctcaacaccgtcaatatctttgctctggtgcatggatactgatgtatggccac
cctgagagcattaacagtatacatcttggtcgcgtcctgagagaattttcccctgaagaa
gttactgccaatatctatacaatggtggatgtcctattgcatcatttcaatctagaactt
cagtgtgggcggtctttgcaggagcttatgatgaaagcttgtgccaaccttgcattcttc
atttggactcatgaactattgccattagacattttactgctagcacttattgatagagat
gacgatccccatgctctgcgaattgtgataagcatacttgacagcaaagaacttcaacaa
agggtgaaactgtatcttatgaatcgtggtccagctgagcattggctttactctggagtt
tttaagcgtaccgaattgcaaaaggcccttggaaatcatctgtcgtggaaggaaagtgtt
agcaggtacccgacattttttgatgatattgctgcaagattgctcccggtgattccccta
atcatttataggtttatcgagaatgatgcttttgatgctgctgacagagttctgcatgtt
tatgcatcattccttcattactatcctttgaatttcacctttgtgcgtgatatactagcc
tatttctatggtcatcttccaagcaaacttatcattcggatattgactgtattagacgtg
aaaaagataccattttctgaagccttccctcagcatatcaactcgtctaatgctcctcca
ctagactattttgctacacttctactgggcctggtgaatcatgtaattcctcccctgaat
aactcctctaagaacggacaagttggagaagcctcaaatgcttctgtgcgagcgccgcat
aacaaggctcaagcaacatcacagggtggtccatccgttgctcctgaaggccagaaacca
ttctatcagctccaggatcctggcacatatacacagttgattcttgaaacggctgttata
gaaatcctctctcttcctataactgcatcccagattgtatcctcacttgttcaaatcgtt
gttcacatacaaccaactctggtccaatccagcaatggaactagtgtcggccaaagttct
gtgttacctacttctccatcagggggaagcactgattccttgggcgctactaggactccc
acagcagcaggattaagtaactctaactttgtttggcgaagtggttatacgtgtcaacag
ttgtcttgcttgttgatccaagcttgtggcctgcttttggctcagctacctcctgagttt
catattcaactctatatagaggcggcacgtgtaataaaggagagctggtggctttccgat
gggaaaagatcagtctctgaattagaatctgccgtttgctatgctttattagatccaaca
tgggctgcccaggacaacacctctacagccattggtaatgtggtggcactcttacatgct
ttcttcagtaaccttcctctagagtggctggaggggacacatctcattatcaagcatctc
agacccgtgacatcaatagctggattgagaatagctttccgtattataggacctttgctc
cctcgattggccaatgctcacaccctcttcaataagacgctatcggtgctgttaagtgta
atggccgatgtctttggaaggaattcacagccgtcagctcctgtccaagcatctgagata
gctgatattatagacttcctgcaccatatagttcattacgaagggcaaggaggacccgtg
caagcaagcagcaagccgagagcggaagtgctggctctcatcggaagagcagctgaaagt
ttcagcccagatgtacagcatcttatgactcacttaaaagccgatgtgaactgttcgata
tatgcagctacacatccaaagtttgttcagaacggcagttaa
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