Salvia hispanica (chia): 125213083
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Entry
125213083 CDS
T09851
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
125213083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
shis04121
]
125213083
Enzymes [BR:
shis01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
125213083
Ubiquitin system [BR:
shis04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
125213083
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
125213083
NCBI-ProteinID:
XP_047969398
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All DBs
Position
3:complement(5999213..6001450)
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AA seq
319 aa
AA seq
DB search
MATIEIQSVECVPASDGVEDEEISSQTHPNNQYPSKPHILLSSAIAPTSVHELLECPVCT
NFMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCRYYSLG
CPEIFPYYSKLKHEAICNFRPYSCPYAGSECIVTGDIPHLVAHLRDDHKVDMHTGFTFNH
RYVKSNPREVENATWMLTVFNCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEVEARNYSY
SLEVGANGRKLTWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGDKKELKLRVTGRI
WKEQQNLDAAGACVPNISI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaattgaaatacaaagtgtggagtgtgtgcctgcatcagatggagttgaagat
gaagagatttcttcacagactcaccccaataaccagtatccttcaaaaccccacatttta
ttatcttccgcaattgcccctactagtgttcatgaattgctggagtgccctgtttgcact
aatttcatgtaccctccaatccatcagtgtcacaatgggcatactctctgttcgacttgc
aagacacgggtgcataaccggtgccctacctgcagacaagagctaggggatatcaggtgc
ttggctctagagaaggttgcagagtcgctagagctgccctgtaggtactactcgctaggc
tgcccggagatattcccatactacagcaaactcaaacacgaagccatttgtaatttccga
ccatatagttgtccatatgctggatcggagtgtatagtaacaggggacattcctcatctc
gttgctcacttgagagatgaccataaagtggacatgcacacgggattcacgttcaatcac
cgatatgtgaagtccaatcctcgtgaagtagaaaacgcaacatggatgttgactgtattc
aattgttttgggcaatatttctgccttcacttcgaagcatttcagctgggaatggcacct
gtttacatggcgttcctacgtttcatgggtgacgaagttgaagcccgcaactatagctac
agcctagaggtaggagcaaatggtagaaagctcacgtgggaaggcaccccacgaagcatt
agagatagtcatcgcaaggtcagggatagccatgacggtcttatcatccaacgcaacatg
gcactcttcttctccggaggcgacaagaaggagcttaagctcagagttactggaaggatc
tggaaggaacagcagaacctagatgctgcaggggcttgtgtgcctaatatttctatctaa
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