Salvia hispanica (chia): 125213124
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Entry
125213124 CDS
T09851
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00900
Terpenoid backbone biosynthesis
shis01100
Metabolic pathways
shis01110
Biosynthesis of secondary metabolites
Module
shis_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
125213124
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
shis01006
]
125213124
Enzymes [BR:
shis01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
125213124
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
125213124
2.5.1.29 geranylgeranyl diphosphate synthase
125213124
Prenyltransferases [BR:
shis01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
125213124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
125213124
NCBI-ProteinID:
XP_047969448
LinkDB
All DBs
Position
3:complement(24445778..24447018)
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AA seq
349 aa
AA seq
DB search
MFVYICVNYNKMSLLISNSLTTLISLGAGRQRQSRSGHPISSILAKQDQNPISPPFDFNR
YTLEKADSVNRALAAAVEMKEPLKIHESMRYSLLAGGKRVRPMLCIAACELFGGDEPTAL
PAACAVEMIHTMSLMHDDLPCMDNDALRRGKPTNHRVFGEETAVLAGDALLSFAFEHVAL
ATRGASPEKVVRVLGELARAIGAEGLVAGQVVDICSEGMAEVGLEHLEFIHHHKTAALLE
GSVVLGAILGGGDEEEVGKLRKFAKCIGLLFQVVDDILDVTKSSAELGKTAGKDLVADKT
TYPKLLGIDKSRELAEELNREAQEQLSHFHPHKAAPLIALANYIAYRDN
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtgtatatttgtgttaattacaataaaatgagccttcttattagtaattctctc
acaacattaatctctcttggcgccggccggcaacggcaatcaagatccggtcatccgatt
tcatcaattttggccaaacaagaccagaatccgatctctccgccgttcgatttcaatcga
tacacgctcgagaaggccgactccgtgaaccgagctctggccgcggcggtggagatgaag
gagcctttaaagatccacgagtccatgcgctactccctcctcgccggcgggaagcgcgtg
cgccccatgctctgcatcgccgcctgcgagctcttcggcggcgacgagcccacggccctc
ccggcggcctgcgcggtggagatgatccacaccatgtccctgatgcacgacgacctcccc
tgcatggacaacgacgccctccgccgcggcaagcccaccaaccaccgcgtcttcggcgag
gagaccgccgtcctcgccggcgacgcgctcctctccttcgccttcgagcacgtggctctg
gcgacgcgcggggcgtcgccagagaaggtggtgagggtgttgggggagctggcgagggcg
atcggggcggaggggctcgtggcggggcaggtggtggacatctgctcggaggggatggcg
gaggtggggctggagcatctggagttcatccaccaccacaagacggcggcgctgctggag
gggtcggtggttttgggggcgattttggggggaggggatgaggaggaggttgggaagctg
aggaagtttgccaagtgtattgggctgctgtttcaggtggtggatgacatcttggatgtg
acgaaatcgtcggcggagttggggaagacggcggggaaggatttggtggcggataagacg
acgtacccgaagctgctgggtatcgacaaatcaagggaattggcggaggaattgaatcgg
gaggcgcaggagcagctgtctcactttcatccacacaaggcggctccattgattgctctt
gccaattatattgcttatagggataattga
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