Salvia hispanica (chia): 125213207
Help
Entry
125213207 CDS
T09851
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 2-like isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
shis
Salvia hispanica (chia)
Pathway
shis03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
125213207
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
shis01009
]
125213207
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125213207
03019 Messenger RNA biogenesis [BR:
shis03019
]
125213207
03041 Spliceosome [BR:
shis03041
]
125213207
Enzymes [BR:
shis01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
125213207
Protein phosphatases and associated proteins [BR:
shis01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
125213207
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125213207
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
125213207
Spliceosome [BR:
shis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
125213207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
125213207
NCBI-ProteinID:
XP_047969571
LinkDB
All DBs
Position
3:10227175..10230183
Genome browser
AA seq
309 aa
AA seq
DB search
MASNGQGIEPALLDDIINRLLEFRNARTVRQVQLSENEIRSLCTTSREIFLSQPVLLELE
APIKICGDIHGQYGDLLRLFEYGGFPPEANYLFLGDYVDRGKQSLETICLLLAYKIKYPE
NFFLLRGNHECASINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDDKILCMHGGL
SPDLTDLDQIRNLPRPSDVPDSGLLCDLLWSDPSREMKGWGMNDRGVSYTFGADKVAEFL
MQRDMDLVCRAHQVVEDGYEFFADRQLVTIFSAPNYCGEFDNAGAMMSVDESLMCSFQIL
KPSDRKRFL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgaatgggcagggaatagagcccgccttgttggatgacataatcaatcggttg
ctcgagttccgcaatgcgcggactgtgcgtcaggtgcagctctcggagaatgagatccgc
tctctctgtacgacgtcgcgggagatcttcctctctcagcctgttcttctcgagctagaa
gctccgataaagatatgcggtgacatccatgggcaatatggggatcttctaaggctattt
gaatatgggggatttccgccagaggccaattatctgtttttaggggattatgtggaccgt
ggcaaacagagtttagaaactatatgccttcttcttgcctacaaaatcaaatatcctgag
aatttctttctcttaagaggaaatcatgaatgtgcttccatcaataggatatatggattc
tatgatgaatgtaaacgtcgattcaatgttagactctggaaagtttttactgattgtttc
aactgccttcctgtggcagctcttatagatgataaaatactctgtatgcatggtgggctt
tctcctgacctgacagacttggatcaaataagaaatttacctcgtccatctgatgtcccg
gattctggtctgctttgtgatttactttggtcggatcccagtagagaaatgaaaggttgg
ggaatgaatgaccggggagtctcatacacatttggtgccgataaggtggctgaatttttg
atgcaacgcgatatggaccttgtttgtcgtgctcaccaggttgttgaagatggatatgaa
tttttcgctgatagacagctagtaacaatattttctgctcccaactattgtggtgaattc
gataatgctggagccatgatgagtgtcgatgagagtttgatgtgctcttttcagattctg
aaaccatctgatcgaaagcggttcttgtag
DBGET
integrated database retrieval system
