Salvia hispanica (chia): 125213340
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Entry
125213340 CDS
T09851
Name
(RefSeq) piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
shis03019
]
125213340
Messenger RNA biogenesis [BR:
shis03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
125213340
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
KH_1
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
125213340
NCBI-ProteinID:
XP_047969788
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Position
3:41485453..41492108
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AA seq
340 aa
AA seq
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MASPPKTHIPLPPDPGDKSLDSETCVPSVPIHVVTHSSQLPEEFLHPSPEKQLVIGFDCE
GADLCRQGTLCIMQLAFPNAIYLVDAIEGGEALVKACKPALESSYITKVIHDCKRDSEAL
YFQFGIKLHNVVDTQIAYSLIKEQEGQKKVPDDYISFVGLLADPQFGGISYDEKEEVRIL
LRQDPNFWTYRPLSELMVRAAADDVRFLLLIYHKMVERLNERSLWYLAVRGALYCRCFCI
NDNNFADWPALPPVPETLIADKQAPEEEILSVLDVPPGKMGCIIGKRGANILEIKECCSA
EIFFGGDKGPPDKAFIIGPVKQVKKAEAMLRGKMLHVYYH
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcccctcccaagacccacattcctctgcctccggatcccggtgacaaatcctta
gacagtgaaacatgtgttccttcagttcctatccatgttgtcacccattcatctcaactt
ccggaagaattcctgcacccttcacctgagaaacaattggtcataggcttcgactgtgag
ggggctgatctttgccggcaggggacgctttgtatcatgcagcttgcttttccaaatgca
atatacctagttgatgccattgagggtggagaggcacttgtgaaagcctgtaagcctgca
cttgaatctagctacatcactaaagtaatccacgactgcaaacgagatagtgaggcatta
tactttcagtttggcattaagttgcataatgttgtggacacccagattgcatattctttg
atcaaggagcaagaagggcagaaaaaagtgccagatgactacatatcatttgttggcctg
cttgcggacccacagtttgggggaatatcatatgatgagaaggaagaagttcgcattctc
ttgaggcaggatcccaacttctggacatatcgaccattgtctgaattaatggtccgagca
gctgcagatgatgttcgctttcttctgttaatctaccataagatggtggagaggttaaat
gagagatccttgtggtatcttgcagttcgtggtgcactttactgccgctgtttctgcatt
aatgataataattttgcagattggccagcactgcctcctgttccagaaactctgattgct
gataaacaagctccagaagaagaaatcctatctgttcttgatgttccaccaggaaagatg
ggatgcataataggcaaacgaggagctaacatattggaaataaaggaatgttgcagcgct
gaaatcttcttcggaggcgataaaggtcctccagacaaggccttcataattggcccggtt
aagcaggtgaaaaaggcagaagcaatgctaaggggtaaaatgctacatgtctactatcac
tag
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