Salvia hispanica (chia): 125213388
Help
Entry
125213388 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125213388 isoform X1
KO
K05294
GPI inositol-deacylase [EC:3.-.-.-]
Organism
shis
Salvia hispanica (chia)
Pathway
shis00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
shis01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
125213388
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
shis04131
]
125213388
Membrane trafficking [BR:
shis04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Post-GPI attachment to proteins factors (PGAP)
125213388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PGAP1
Abhydrolase_6
DUF676
Hydrolase_4
Abhydrolase_1
Palm_thioest
Esterase
Motif
Other DBs
NCBI-GeneID:
125213388
NCBI-ProteinID:
XP_047969859
LinkDB
All DBs
Position
3:complement(33422984..33431710)
Genome browser
AA seq
1105 aa
AA seq
DB search
MGLRDSVDMKALRAKFRVATVVIVSIWIGLPGVYHLLKPVENGCVMTYMYPTYIPLPTPK
NVSTSKYGLFLYHEGWRKIDYNDHLKNINGVPVLFIPGNGGSYKQVRSLGAESDRAYRGG
PLEWDSNHAYPIFGEGIDIDLTNILLPSQYTSMLDWYAVDLEGEHSAMDGRILQEHAEYV
VYAIHTILDLYKESHAVHAKGGLPKSVILVGHSMGGFVARAAVVHPHLRKFAVETILTLS
TPHQSPPVALQPSLGHYYAQVNQEWRKGYEVQTSRTGRYLSDPLLSHVVIISVSGGYNDY
QVRSKLESLDGIVPHTHGFFISSTGMRNVWLSMEHQVILWCNQLVVQMSHTLLSLIDTKT
GQPLNDVQQRLGIFKKMLDSGIPKDFFASTQLQQAHKSDHIRDKKKKVNPGLSSGVSGCP
SSSQWSEDGLERDLYIQTSTITVLAMDGRRRWLDIQKLGEDGKNHFVFVTNLSPCSGVRL
HLWQEKETSASEVSMNKRVVEVTAKMVHVPSGPAPRQIEPGSQTEQAPPSAIFWLGPQDM
HGFRFLTVSVAPRPTISGRPPPAASMGVGQFFNPKDGEKVFSSFQLISSLYTEQDMTLKE
DHPLALSLTFSASLGLLPVSLSIKTTGCGIKKSEFPIEESGDEETSRLCKRRCFPPVALA
WDAISGLHVFPNLYSETIVVDSSPALWSSSQNSDNSNVLLLIDPHCSYASTIGVSVTASS
GRFLLLYFSQISGLCFSVAFFALMRQAYAWELDQPIPSLLSAVESNLRIPRAFFFLAILP
ICFAVLLSCLSSKALPPIISFTVVAILCYVFANGAIVLLILLSQMLFYVAGILHVAVKKW
WQVCERNFSFHFLQRISSSFASTRVVRILMANPLLITSLLAVMLVCLVHPALGLFVLLLS
HVPGCHSALSSFLMASFRSHVQTKEFYESGSEGEGTDMVHNSSYDNNSKLFPTNETLRGS
PKYTKSYGDAQLEIFHHRHGLLVLHLLAVLMFVPSLVAWLQRIGIGQNLPWFWDSVLSIG
VVLHGLCNSKPEFSFYLFPIGSWEIRLSFAYLVAGYFSYLSALALAPYRVFYAMAAIGVV
SFAFRVIQRKNGEAYHRNRKHSHRH
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atggggcttagagatagtgtagacatgaaagcgctcagggcgaagtttagagtagcaact
gtggttatagtgtccatatggattgggcttccaggagtgtatcatctgctgaagccagta
gaaaatggttgtgtcatgacgtatatgtatccgacatacattccacttcccacgcctaag
aatgtgtcgactagtaaatatggtttgttcttgtaccatgaaggctggagaaagattgat
tataatgatcaccttaagaatataaatggtgtgccagttctttttatcccaggcaatggt
ggaagctacaaacaggtcagatcccttggtgcagagtctgatagggcttatagaggaggt
ccacttgaatgggactctaaccacgcttatccaatttttggagagggcattgatattgat
ttgactaacattttgttacctagtcaatatacttccatgcttgattggtacgcagtggat
cttgaaggtgaacattctgcaatggatggtcggattcttcaagaacacgcagaatatgta
gtatatgccattcacacgattttggatctatataaagaatcgcatgctgtgcatgcaaaa
ggtggtctccctaaaagcgtgatattagttggtcactctatgggtggttttgttgctagg
gctgcagtagtgcacccccatttgagaaagtttgctgttgaaactattctgacgctctct
acgccccatcagtctcctcctgtggcattacagccatccttgggccactattatgcacaa
gtaaatcaggaatggaggaaaggatatgaggtccaaacctctagaactgggcgctacttg
tcagatcctttgctttcccatgttgtcatcatctctgtttctggtggttataatgattac
caggtacgctcgaaattagagtcccttgatggcattgttcctcacacacatggctttttc
ataagtagtactggcatgagaaacgtgtggttatcaatggagcaccaggttatcttatgg
tgtaatcagctagttgtgcaaatgtctcacactctcctcagtctgatagacacgaagaca
ggccaacctttaaatgatgtacagcaaagacttggaatattcaaaaaaatgctcgatagt
ggcattccgaaggacttctttgcatcgacacaactgcaacaagcacataaatctgaccat
attcgtgataaaaagaagaaagtgaatcctggactgagttctggagtatctggttgtcca
agtagtagccaatggagtgaagatggacttgaaagagacctctacatccaaaccagtact
atcactgttttagcgatggatgggagaagacgatggttggacattcaaaaactgggtgag
gatggaaaaaaccactttgttttcgtcacaaatctttcaccttgttctggtgtgagacta
catctttggcaagagaaggaaacttcagcttcagaagtttctatgaacaaacgggttgtt
gaagtaacagctaaaatggtgcatgttccatctggaccagctccaaggcagattgagcca
ggaagtcaaactgaacaagctcctccatctgcaatattttggttgggtcctcaagatatg
catggctttcggtttctgacagtttctgtggctccccgcccaactatttcagggagaccc
ccaccagctgcatccatgggagtcggacaatttttcaatccaaaggatggagagaaagtt
ttctcctctttccagttgatcagttcattatacacggaacaggatatgactttgaaggaa
gatcatcctcttgctctcagtcttacattctctgctagcttaggtcttcttcctgtttct
ttatctatcaaaacaactggctgtgggattaaaaaatcagaatttcccattgaagagtct
ggagatgaggaaacaagtagactttgtaagagacgctgtttcccacctgtggcacttgct
tgggatgcgatatctggcctgcacgttttccctaatctgtattctgaaacaattgttgtg
gattcttctccagcactctggagttcttctcaaaattctgacaattcaaatgttttgtta
ctgatagacccacattgctcttacgcaagcactattggtgtctccgttactgctagttct
ggtagattcttgcttttatacttctctcagatcagtggtctatgcttctctgttgcattt
tttgctctgatgcggcaagcatatgcatgggaacttgaccagcctataccatcgctgtta
tctgctgttgaatcaaacttgcgaatccctagggcatttttcttcctcgccatattgcct
atttgctttgctgtcctcttgtcttgcctaagctctaaagcccttcctccaattataagt
ttcactgttgtcgcaatcctttgttatgtttttgcaaatggcgcgatagttctcttgata
ttactttcccaaatgcttttttatgtagccggcattctacatgtagctgtcaagaaatgg
tggcaagtttgtgaaaggaacttctcctttcattttctccaacggatctcctccagcttt
gcatctaccagggtggtaaggattttgatggcgaatcctctgcttatcacgtcattgctt
gctgttatgttggtgtgtcttgtgcatccagcactaggcctatttgtattgctcttatca
cacgttccgggctgccacagtgctctatccagttttttgatggcttcatttcgcagccat
gtccagaccaaggaattttacgaatctgggagtgaaggcgaaggtactgatatggtacat
aactccagttacgataacaacagcaagctgttcccgacaaatgagacacttagaggtagc
cccaaatacacaaaaagctatggtgatgcacaattagagatcttccaccaccggcatggg
ttgcttgttttacatttgcttgcagtattgatgtttgtcccttcacttgtggcctggctt
cagcggattggtattggtcaaaatcttccgtggttctgggattctgtactcagcattggg
gtcgtactgcatggtttatgcaattccaagcccgaattcagtttctatctatttcccatt
ggatcctgggaaattcgactgagctttgcttatcttgttgctggatacttttcctatctt
tcagccttggcattggctccctacagagttttttacgcaatggctgcaattggagtcgtc
tccttcgctttcagagtcatacagaggaagaacggcgaggcatatcaccgcaacagaaaa
cattcccacagacattga
DBGET
integrated database retrieval system