Salvia hispanica (chia): 125213416
Help
Entry
125213416 CDS
T09851
Name
(RefSeq) uncharacterized protein LOC125213416
KO
K24869
S phase cyclin A-associated protein in the endoplasmic reticulum
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
shis03037
]
125213416
Cilium and associated proteins [BR:
shis03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
125213416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SCAPER_N
Motif
Other DBs
NCBI-GeneID:
125213416
NCBI-ProteinID:
XP_047969909
LinkDB
All DBs
Position
3:complement(35427946..35435733)
Genome browser
AA seq
1664 aa
AA seq
DB search
MERTDGGDDQASGWMQVKKKHRSNLKFSLHGWVEGLSGKQRFSKPNNQISIAKKSESSSS
ATNQRDNKGKDCAVRDRERDSSKATEPASISTDDGAVQRCLDGDSVNATKHTSSSNGNVA
INHYLDKRVVSQSNEDLGSSHLAAKSNADPSHKVVVSQGSTHKDNVLPQIKWGDLDERTL
KHYGKASGAEFESVGVKNSNLVSVKVDDTSECLPCIVPVDPDETKSDRDHCLPEPHSSSL
RTVSVEETDKEVNEVSSEDVKDQITSERIVGQSTSISGSNFEHEHVKPDNEVPCSSSGEN
GACRDNKETERAKSANVSVAHLLDSATSSRTIDEAKSEESILAVPIEESSNKKSEANSDG
LLDAQNADAVASVEVGESKERFRERLWCFLFENLNRAVDELYLLCELECDLEQMKEASLV
LEEAALDFRELNSRVETFEKSKRSSSHGADGSPLVLQSDHRRPHALSWEVRRMTTSPHRA
EILSSSLEAFRKIQRERTSERSHNSMNPGSDCQSCNLGTRDIVDLEKYIKKDDLVSGSKE
STVKVADNMTGVSVTAQHLNKEKKNHDSKPGSGALKLHQKEGSIPYVNGKSKTPTENNTA
EKNMKLADPLRRPVPEREREKRNGFSGKSMDAWKEKRNWEDILAIPHRVSSRFSYSPGLS
RKSTERVRVLHDKLMSPEKKKKSALDLKKDAEEKHARATRIRAQLEHERVQRLQRTSEKL
SRVSEWQTVRSNKLRESMYARHQRSESRHEAYIAQVVRRAGDETSKVNEVRFITSLNEEN
KKHILRKKLHDSELRRAEKLQVIKTKQKEDMAREEAVLERKRIIEAEKLQRLAETQRRKE
EAQVRREEERKASSAAREAKAIEHMRRKEIRAKARQEEAELLAQKLAERLSESEQRRKFY
LEQIRERASMDFRDQSSPLLRRFASKEGQAQVRSAAYSNGDDNLTNDSSFPSGTSIVNGE
ALQHSLKKRIKKIRQRLMSLKHEFPEPSAALESCSLGYRTAVGTARRKVGRWLQDLQKLR
QARKDGAANFGLITAEIIKYLEGKDAELQASRQAGLLDFIASALPASHTSKPEACQVTIY
LLRLLKVVLATPANKCYFLVQNLLPPLIPMLATALENYIKMAASSNLPGPTNIVSSKVLN
GNLESISEIVDGFLWTIAAIVDHVSCNEYQLQMQDGLIELVIAYQIIHRLRDLFALYDRP
QVEGSPFPSSILLGINLLTVLTSKFKGSYSIDWDSFPNDIMQGNKLGEREFSGPADLQHE
SSMDVTPSLPTGDLPADSLDVPEGKKDGCSNIEVTDSQVPECDTSLDVDRVASKDAMDDS
AGPLVDKYQCEDSNKCVGNSAELKNRNGPEAKQPAVFLLAAMSETGLVCLPSMLTAVLLQ
GNNRLSPEQSSYVLPSNFEEVATGVLKVLNNLALIDISFIQKMLAQPDLKMEFFHLMSFI
LSHCTSNWGVANDKIGTLLLESLALLGYFALFHSENQAVLRWGKSPTILHKVCDLPFVFF
SDPELMPALAGTLVAASYGCEQNKAVIQQELSMDMLLPSLKSCKSNSNQCGPLSAEDAGE
LLSRTGVERKAQADTSQKSNRSNPRNARLVPQRGGGGVNTRGLKSRNIRDSKLVKVSEEM
QTGAAQSASETSTLMLHSRFPVSFVGKAEEFFTAEVNTSNGELV
NT seq
4995 nt
NT seq
+upstream
nt +downstream
nt
atggagaggactgatggtggggatgatcaggcttctggatggatgcaagtgaaaaagaaa
cacagaagcaatttgaagttctcattacatggttgggttgaagggctgtctggaaaacag
aggtttagcaagccaaataatcaaatatcaattgctaaaaaatcggagagtagctcaagt
gcaacgaaccaaagagataataaaggtaaagattgtgctgtgcgtgatcgtgagcgtgac
agcagcaaggctacagagcccgcttctatctctactgatgatggggcagttcaacgttgc
cttgatggtgacagcgttaatgctaccaaacacacctcgagttctaatgggaatgtggca
attaatcattaccttgacaaacgtgttgtcagtcaaagcaatgaagatttaggttcttct
catttggccgctaaaagtaatgcagatcctagtcataaagtagtcgtcagtcaaggaagt
acccacaaagataatgtccttccacaaataaaatggggggatttggatgagagaactctc
aaacactacggaaaagcttccggagctgaatttgagtctgtgggagtcaaaaatagcaat
ttggtctctgtgaaggttgatgatacttctgagtgtcttccctgcatcgttccagttgat
cccgatgagacgaaatctgatagggatcattgtcttccagaaccccattcttcatctctg
aggactgtatctgttgaagaaactgataaggaggtgaatgaagtatcttcagaagacgtt
aaagatcaaattactagtgagagaatagttggtcagagtacttctatttcgggctctaat
ttcgaacacgagcatgtcaagccagataatgaggtgccctgcagttcatctggagaaaac
ggtgcctgcagagacaacaaagagacagaaagggccaaatcagctaatgtttcagttgcg
catcttttggattcggctacaagtagtcggacaattgatgaagctaaaagtgaagaatct
atattggcagttccaattgaagaatcgagcaataaaaaaagtgaagcaaactctgatggt
cttctagatgcccagaatgcagatgctgttgcttcagtcgaggtgggtgaaagcaaagaa
agattcagagaacgtctttggtgctttctctttgaaaacctcaatagggctgtagatgag
ctctatcttctctgtgaacttgaatgcgatcttgagcaaatgaaagaagctagtcttgtt
cttgaagaagctgcattagactttagagaattaaatagcagagtagaaacttttgagaaa
tcaaaaagatcctcgtctcatggggctgatgggagtccattggttttgcagtccgatcat
cgcagaccacatgccctctcatgggaggtccgtcgaatgactacttcaccacacagggca
gaaattttgtcttcatctcttgaagctttccgcaaaatacagcgagagagaacaagtgaa
cgttcccacaactctatgaatccggggtctgattgtcagagttgtaacttaggaacaagg
gatattgtggacttggagaagtacattaaaaaagatgatttggtgagtggctctaaagaa
tcaacagtgaaggtggccgacaacatgactggtgtatcagttacagctcagcatctaaat
aaagaaaagaaaaaccacgattcaaagccaggttctggggcattgaaattacatcaaaaa
gaaggttctattccctacgttaatggaaagagcaaaactccaacagagaacaacactgct
gagaaaaatatgaagttggctgatccgttgagaagacctgttcctgaaagagaaagggag
aagagaaatggattttcagggaagtccatggatgcttggaaagagaagagaaattgggag
gacatacttgcgatcccacatcgtgtgtcttcccgcttctcatattcacctggcttaagc
aggaaaagcactgagcgggttcgtgttctgcatgataaacttatgtctcctgagaaaaag
aaaaaatctgctcttgatctaaaaaaagatgctgaagagaaacatgctcgtgccaccaga
atcagagctcaacttgagcacgagagagtgcaaaggcttcaacgtacatcggagaaactg
agccgtgtaagtgaatggcaaactgtgcgcagcaataagttgcgagagtcaatgtatgct
cgccatcaacgtagtgaatccagacatgaagcttatatagctcaggttgtgagaagagct
ggcgatgagaccagtaaagttaatgaggtacgttttatcacctcactgaatgaagagaat
aaaaagcacatattgcgcaagaagcttcatgattccgagttgaggagagcagagaagctt
caggtaataaaaactaaacagaaagaggacatggccagggaagaggctgttttggaacgt
aaaaggatcatcgaagctgagaagttgcagcgccttgcagaaactcagcgaagaaaggaa
gaggctcaagttagaagggaagaagagaggaaagcctcaagcgctgctcgtgaagccaag
gctatagaacacatgaggaggaaagagatccgagccaaagcgcggcaggaggaagctgaa
ctcttggctcagaaattagctgaaagactcagtgaaagcgaacagaggcggaaattttat
ctagaacaaattcgagaaagagcatctatggattttagggaccagtcttcgcctttactg
agacggtttgcaagtaaagaaggccaagcccaagttcggtcagctgcttacagcaatgga
gatgataatcttaccaatgatagtagtttcccatctggtactagtattgtaaatggtgag
gcgttgcaacactcgctaaagaagagaattaaaaaaatacgtcaaaggctaatgtctcta
aaacatgaatttcccgagccttcagctgcacttgaaagttgtagtcttggttataggact
gctgttggaactgcaaggagaaaagtcggtaggtggcttcaggatttgcaaaagcttcgc
caagcaagaaaagatggtgctgctaattttggactgataactgctgaaattatcaagtat
ctggagggaaaggatgctgaattgcaggcttctcgacaagccggcctgcttgattttatt
gcttccgcccttcctgcttctcacacgtccaaacccgaagcttgccaggttactatatat
cttttaaggcttttgaaggtagtgctggcaacgccggcaaacaaatgctattttcttgtc
cagaatcttttgcccccacttattccaatgttggcaaccgcccttgagaactatatcaag
atggcggcatcatcaaatcttcctggtccaactaatatcgtgtcaagtaaagtgttgaat
ggaaatttggagtcaatttctgaaattgtggatggtttcctgtggactattgcagcaatt
gttgatcatgttagctgtaacgagtaccaactgcagatgcaggatggtttgatagagctt
gttattgcataccaaattattcaccggttaagagatctttttgcgctttatgatagacct
caggtggaaggttctcctttcccttcatctattctcctaggtattaatttattgacagtt
ctgacttcaaaattcaaagggtcatactcgatagactgggattcttttccaaatgatata
atgcaaggaaataaactcggggagagagaattttctgggccagctgatttacaacatgaa
tctagtatggatgtcacaccctctttgccaactggcgatttaccggcagattctctggat
gtgccagagggtaaaaaagatggatgttcaaatattgaggtgaccgatagtcaagttcct
gaatgtgatacctctcttgatgttgatcgcgttgcttctaaagatgccatggatgattca
gctggacctctggtagataagtatcagtgtgaggacagcaataaatgtgtaggtaacagt
gctgagctaaaaaatagaaacggccccgaagcaaagcagcctgctgtgtttcttcttgcg
gcaatgtccgagactggcttagtatgtcttccttccatgttaacagcagtgctattgcag
ggaaataaccgattatctcctgaacagagctcgtacgtgcttccatctaattttgaggaa
gtagcgactggagttctgaaggtcttgaacaatctggctctgatagatatatctttcatc
cagaaaatgctggctcaaccagatcttaaaatggagttctttcacttgatgagttttatt
ctttctcattgcacaagcaactggggagtcgccaatgataagattggaaccctcttgctg
gaatctttggcacttcttggttattttgcgttattccactccgaaaatcaagccgtccta
cgctggggaaagagtcctacgattcttcacaaggtttgcgatttgcccttcgtgttcttc
agcgatccggagctgatgcctgctttagccggcacattagtagctgcctcatacggatgt
gaacagaacaaggccgttattcagcaggagctcagtatggacatgctcctcccgtcactc
aagtcgtgcaaaagcaattcaaaccagtgtggcccgttgtcagccgaggatgctggtgaa
cttctgagtcggaccggtgttgaaagaaaagctcaagctgacacatctcagaaatccaac
cggagcaatccaagaaatgctcgtctcgttccccagagaggcggtggtggtgttaacacg
agaggtctgaagtcgagaaacattagagacagcaaactggtgaaggttagtgaagaaatg
cagacgggtgctgctcaatctgcttcggaaacttccacgttgatgctgcactcgaggttc
ccggtaagcttcgtcgggaaagcagaagagttttttacagcagaggttaatacaagcaac
ggtgaattagtttga
DBGET
integrated database retrieval system
