Salvia hispanica (chia): 125213426
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Entry
125213426 CDS
T09851
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1A-like
KO
K15559
regulator of Ty1 transposition protein 103
Organism
shis
Salvia hispanica (chia)
Brite
KEGG Orthology (KO) [BR:
shis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
shis03021
]
125213426
Transcription machinery [BR:
shis03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125213426
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
PspA_IM30
CTK3
DUF1598
Mucin15
Stathmin
CREPT
Motif
Other DBs
NCBI-GeneID:
125213426
NCBI-ProteinID:
XP_047969932
LinkDB
All DBs
Position
3:13742316..13745938
Genome browser
AA seq
512 aa
AA seq
DB search
MNSVFSEQILADKLSKLNSTQQCIETLSHWCIFHRSKAELVVTTWDRQFRSSEIAQKVPL
LYLANDILQNSKRKGNEFVTEFWKVLPSALKELESKGDDRGKNVVSRLVGIWEERRVFGS
QAKSLRDAMLGEELPPPLELRKKRSRSVRIVKKDSRSIKTKLSIGGTAEKIVSAFHSVFS
EHNSEDEELSKCKSAVHRVKKMEKDVDVALTKAKDPSRKTLAKELEEEESTLKQCIEKLK
EVENNRAALVAQLRDALHEQESELENVRTQMQVAQAQVEEATHMRKQLNEDRVFDSKPST
TPTDANPNSEQSSKKSAAAIAAEVADRLAASTSSQYIMTSVLSSFAAEAAKGAGLTPSST
STTSFSSTQSNPMSKSENPPVSDPKAYMAAQINPSQNPYQTVMAQPSMQVPNSQALYHSV
PNQPSMQYMQPGSYDYSGLSPMPPGPPPPAPPSYMVNPMVQMLPMGHQPSTVPQQQPMSV
SQQQPPPPAGFRPLAPIQAPGMVYFSHPYRLQ
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaatagtgtgttcagtgaacagattcttgctgacaagctttcgaagctcaatagcact
cagcaatgcattgagactttatcgcactggtgtatatttcaccgaagcaaagcagagcta
gtggttacaacatgggacagacaattccgcagttcagaaatagcccagaaagtgcctctt
ttatatcttgcaaatgacatcttacagaacagcaagcgtaaaggcaatgaattcgttacc
gagttctggaaagttcttccttcagcactcaaagagttagagagtaaaggcgatgatcgt
ggaaagaatgtggtgtctagattggttgggatatgggaagaaagaagagtttttggttct
caagctaaaagccttagagatgcgatgcttggagaagaattacctccacctttagagctc
aggaagaaacggtctcgctctgtcagaatagttaaaaaggactcacgttctataaagacg
aaactgagcattggtggtacagcagagaaaattgtttcagcatttcactcggtgttcagt
gaacacaacagtgaagacgaagaattgagtaaatgcaagtctgctgttcatcgtgtgaaa
aagatggagaaagatgttgatgtggccttaacaaaagccaaagatccatcgcgcaagacc
ctagccaaagagttggaggaggaagaaagtacattgaagcaatgcattgaaaaacttaaa
gaagttgaaaacaatagagccgccctcgttgctcagttgagggatgcacttcacgagcag
gaatctgaactggagaatgttcggacacagatgcaggttgcacaggcacaagtagaagaa
gccacacacatgcgaaaacaattgaatgaagatcgcgtattcgactcaaaaccatcaaca
acgccaacagacgccaatcccaactcggagcaatcatcaaaaaaatccgctgctgcaatt
gcagctgaagttgcagataggctagcagcctcgacatcctcccagtatatcatgacatcg
gttctctcctcatttgctgccgaagcagctaaaggtgctgggctgacgccatcatcaacc
tcaacgacttctttctcatcaacacagagcaatcccatgtcaaaatccgaaaacccgcct
gtttcagatcctaaagcttacatggctgcgcagataaacccttcacaaaacccttatcaa
accgtcatggctcagccctcgatgcaagttcccaactctcaagccctctatcactcagta
cctaaccagccttctatgcagtatatgcagcctggttcgtatgattatagtggcttgagt
cctatgccgcctgggcctcctccaccggcccctccatcatacatggttaacccgatggtg
caaatgctgccaatggggcatcagccatcaacagtacctcagcagcaacccatgtcggta
tctcaacagcaaccgcctccgcctgcaggctttcgccctctagctcctattcaggcaccc
ggaatggtatatttttcacacccttaccgattgcagtga
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integrated database retrieval system
