Salvia hispanica (chia): 125213444 Help Entry 125213444         CDS       T09851                                  Name (RefSeq) DNA mismatch repair protein MSH6   KO K08737   DNA mismatch repair protein MSH6 Organism shis  Salvia hispanica (chia) Pathway shis03430   Mismatch repair Brite KEGG Orthology (KO) [BR:shis00001]  09120 Genetic Information Processing   09124 Replication and repair    03430 Mismatch repair     125213444  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:shis03400]     125213444 DNA repair and recombination proteins [BR:shis03400]  Eukaryotic type   SSBR (single strand breaks repair)    MMR (mismatch excision repair)     Mismatch and loop recognition factors      125213444 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  MutS_V MutS_III MutS_I MutS_IV MutS_II PTM_DIR17_Tudor DUF3295 Tudor_KDM3B AAA_29 Motif Other DBs NCBI-GeneID:  125213444 NCBI-ProteinID:  XP_047969957 LinkDB All DBs Position 3:complement(11849626..11857488) Genome browser AA seq 1306 aa AA seqDB search MAPSKKATNGRSPLVNQQRQITAFFGKSPSGSSPAPSESPSPSLSKLNPNPRVGPPPSQT PITPSPLNSKRKKPLLVITPNLGASSAEKPVSEKKSYGAEVIDRRVRVYWPLDKSWYEGV VKSFDEASGKHLVQYDDAEEESLNLSGEKVEWIEEPVKKKLRRLRRFSVVEDDDFEEEGD EPDLKELEDDSDDEDWEEKAGNGILEDEDCLEVMELEEEGSGGAEVRKNTSLRKQKGGEG EVVSGKKGKIVGELKSSFSKVSPSGKAVNLIEPISRTSTYSVKASDTTKEHSFSLTASLL DSPSMVDTAERFAKRESEKLHFLELDRRDANRRRPGDEKYDHRTLYLPPNFVKNLTGGQR QWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAKELGLQYMKGDQPHCGFPEKNFTINVE KLARKGYRVLVVEQTETPEQLGIRRKESGSKDKVVKREICAVVTKGTLTEGEYFTTNPDA SYIIAVTESCQISASEQGIHIFGICAVDVATSKIILGQFRDDADCSSLCCLLSELRPVEI IKPAKLLCTETEKALFRHTRNPLVNELVPFSEFWDADKAISEVTSIYQRLGGHSHSSSEN KSTLQQSDSSRENDGRNCLPEVLSNLISEGENGSQALSALGATLFYLRQAFLDESLLRFA KFDLLPCSGLGEIAQKPYMVLDAAAMENLEIFENSRNGESSGTLYAQLNHCATAFGKRLL RTWLARPLYHLKSIKERQDAIAELRGVNQPNVLSFRKELSKLPDMERLLARIFAGSEASG RNANKVVLYEDASKKKLQEFISVLRGCEMMTNSCSALGAIFENVESTLLRHLLIPGSGIP DANPILRHFKDAFDWEEAYQSGRIIPREGADLDYDAACQVVKDIESSLKKHLKEQQKLLG DPSICYVTIGKDAYLLEMPESLTQAIPKEFELRSSKKGFVRYWSPVIKDLIGELSRAESE KESKLKSIFQRLIERFCENHIKWRQFISTVAELDVLISLSIASDYYEGRSCRPVIASSNP DEVPFLRAKNLGHPVLRSDSLGEGTFVTNDVTLGGSGNSSFILLTGPNMGGKSTLLRQVC MAVILAQMGADVPAESFALNPFDRIFVRMGAKDQIMAGQSTFLTELLETAAMLTSATRSS LVALDELGRGTSTSDGQAIAAAVLEHFVHTVQCRGMFSTHYHRLAVDYKSDPKVSLRHMA CQVGKGAGDLEEVIFLYKLTPGACPKSYGVNVARLAGLPDTVLRKAAAMSQEFEGTYGNK LGATHRWEDKASLIIENLIKITATAESKNIDLLTSLQSRASLLLQQ NT seq 3921 nt NT seq  +upstreamnt  +downstreamnt atggcgccgtcgaagaaggccaccaacgggcgctcccctttagtcaatcaacagcgtcaa atcaccgctttcttcggcaagagcccgtccggatcatctccggccccttcagaatcgccc tctccatccctctccaagctaaaccctaaccctagagtgggcccgcctccaagccagacc cccatcactccttcacctctcaattccaagcgtaagaagcccctcctagttatcaccccc aatttgggcgcctcttccgctgagaaacctgtctccgagaagaaatcgtacggggcggag gttattgacagacgggtcagggtttattggccgcttgataagtcgtggtacgagggcgtc gtgaagtcgtttgatgaggcatctgggaagcatttggttcagtatgacgatgctgaagag gaaagtttgaatctttcgggggaaaaggttgagtggattgaggagcccgtgaaaaagaag cttcggaggttaagaaggttttctgtagtggaagatgatgatttcgaggaggagggggac gagcctgatctcaaagagctagaagatgattcggatgatgaggactgggaggaaaaggca gggaatggaatattggaagatgaggactgtttggaggttatggagttggaagaagaggga agtggtggagctgaagttaggaagaatacgagcctcaggaaacagaaagggggtgaagga gaagttgtttctggtaaaaagggaaaaattgttggggagttgaagagtagcttttccaag gtttctccttcgggcaaggctgtgaatctgatcgaacctattagcagaactagtacttat agtgtgaaggcatctgatacaaccaaagaacactctttttctctaacagcatcccttctg gatagcccttcgatggtagacacggcagaaagatttgccaaacgtgaatcagagaaattg cacttccttgagttagatcgtagagatgccaaccggaggcgccctggggatgagaaatat gatcatagaaccttatacttgcctccaaactttgtgaagaatttaacaggtggccagcgg caatggtgggagtttaagtcgaagcatatggacaaagttctctttttcaagatgggcaag ttttatgaactttttgaaatggatgcacatgttggagccaaagaacttggtttgcagtat atgaagggagaccaacctcactgtggatttccagagaagaacttcacaatcaatgtagag aagctggcaagaaagggttatcgagttcttgttgtggagcaaacagagacacctgaacag cttggcattcgtcgaaaagaaagtggctccaaggataaggttgtcaaacgcgagatatgt gctgttgtgactaaaggaactttaaccgagggagaatattttacaacaaaccctgatgct tcatatataattgctgtgacggaaagctgccaaatttcagcaagtgaacaagggatccac atttttggtatctgtgctgttgatgttgctacaagcaagattatcctggggcagttcagg gatgatgctgattgcagttcgctttgctgtttattatctgaattaaggccagtggaaatt ataaaaccggctaagttgctgtgcactgagactgaaaaggcactatttaggcatacacga aatcccctggttaatgagctggttcctttctctgaattttgggatgctgataaagctatt tctgaagttacaagcatttatcagcgccttggtggtcattctcatagttcatcagaaaat aaaagtactctgcagcaaagtgattcttcaagggagaatgatggtagaaactgcctacca gaagtgctatccaacctcataagcgagggtgaaaatggaagccaagcactatcagcactt ggtgcaactcttttctatttaaggcaggctttcctggacgagtctctcctcagatttgct aaatttgatctgctcccatgctctggtcttggtgaaattgcccaaaagccatacatggtt cttgatgctgctgccatggaaaaccttgagatatttgaaaatagcagaaatggagaatct tctgggacattatatgctcaattaaaccattgtgccacagcatttggtaaaaggctactg aggacatggctggccagacctttatatcatctcaagtcaattaaggagcggcaggatgct atagcagaactgaggggggttaatcaacctaatgtgcttagcttcagaaaggagctatcg aaactacctgacatggaacgcttgcttgcacggatatttgctggcagtgaagctagtggc aggaatgcaaataaagttgttctctacgaggatgcatcaaaaaagaagcttcaagagttc atttcagttcttcgtggatgtgaaatgatgaccaattcgtgctctgcacttggtgctatt tttgagaatgtggagtctacactactacgtcatctattaattcctggttcagggattcct gatgccaatccaattttgaggcatttcaaggatgccttcgattgggaggaggcatatcaa tcagggcgcattatacctcgagaaggagcagatcttgattatgatgctgcatgccaagtt gttaaagacattgaatccagtctcaaaaaacatctaaaggagcagcagaaattacttgga gatccatctatctgttatgtaacaattggaaaagatgcataccttttggaaatgcctgag agtttgacacaggcgattccgaaggaatttgagttacgatcatctaagaagggttttgtc cgatactggtcccccgtgataaaagatttaataggagagctttcacgagcggaatcggag aaggagtcaaaattgaagagcatatttcagaggttaattgaacgattttgtgagaatcac attaaatggaggcaattcatctctactgttgcagagctggatgtcttaatcagcttatca attgcaagtgattattatgaagggagaagttgtcgtccagttatagcttcatcgaatcct gatgaagtgccattcctcagggctaaaaacttagggcacccagttttaaggagtgattcc ctcggagagggcacctttgtcaccaatgatgtcacactaggtggttctggcaactccagc tttatactgcttacgggtcctaacatgggtggaaagtctactcttctacgccaagtttgc atggctgtaattttggcccagatgggagctgatgtaccagcagaaagttttgctttgaat ccttttgaccgtatatttgttcgaatgggtgctaaagatcagattatggctggtcaaagc acatttctgacagagcttctggaaactgcagccatgctgacatcagcaacgcgcagctca cttgtggcgctggacgagctgggacgaggaacttcaacatcagatgggcaagccatcgct gcagcagtgctcgaacattttgttcacacagtgcaatgccggggaatgttttctacgcat tatcatagattagctgttgactacaagagtgatcctaaggtctccctccgtcatatggct tgccaagttggaaaaggagccggagatcttgaggaagtaatcttcctttacaaattgaca cccggcgcatgccctaaaagttatggtgttaatgttgctaggttagcaggacttcctgat acagttctacgaaaagctgcagcaatgtctcaggagtttgaaggaacttatggcaataaa ttaggtgccactcataggtgggaagacaaagcatcattgatcatcgaaaacttgataaag atcacagctactgctgaaagcaagaacatagacttgttaactagcctgcagtcgagagcg agtttacttctacaacaatag

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